PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OPUNC03G14090.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 169aa MW: 18422.1 Da PI: 9.2223 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 37 | 7.3e-12 | 26 | 84 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 + rk +NR++Ar+sR +K+++++ L+ ++++L eN+a++ + + + +++e+ OPUNC03G14090.1 26 RQRNRKKSNRLSARKSRMKKQQYVDGLAVEAEKLRRENDAMRAGVGAVLQRCRMVEQEN 84 3345788***********************************99888888887777776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 9.6E-11 | 19 | 78 | No hit | No description |
SMART | SM00338 | 2.8E-12 | 21 | 86 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.979 | 24 | 87 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.3E-8 | 26 | 80 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.44E-8 | 26 | 79 | No hit | No description |
CDD | cd14702 | 1.09E-14 | 27 | 78 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 30 | 44 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence Send to blast |
MSVAPAPEGS ARRAAEATAT ATEEERQRNR KKSNRLSARK SRMKKQQYVD GLAVEAEKLR 60 RENDAMRAGV GAVLQRCRMV EQENRVLTAH ARELCSALQL RGSQLRLLGE VAGVPLDVPD 120 VADHLVQLYG GGGGGLGMPP LSPPRIPVLF FQPDSVMDAV SMIQDYESI |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC226819 | 0.0 | AC226819.1 Oryza minuta clone OM__Ba0167K10, complete sequence. | |||
GenBank | AC226821 | 0.0 | AC226821.1 Oryza minuta clone OM__Ba0192M11, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015631799.1 | 2e-76 | ocs element-binding factor 1 | ||||
TrEMBL | A0A0E0KCR8 | 1e-118 | A0A0E0KCR8_ORYPU; Uncharacterized protein | ||||
STRING | OPUNC03G14090.1 | 1e-119 | (Oryza punctata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12504 | 28 | 37 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75390.1 | 1e-12 | basic leucine-zipper 44 |