PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC02G31510.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family GeBP
Protein Properties Length: 322aa    MW: 35413.7 Da    PI: 4.3705
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC02G31510.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57349.21.5e-15143234298
           DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfk.vsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskk 94 
                      +f+r+ws eDe+ +L +l   + ++g  +   +da++ ++ +s++ + + +++l  K+  LK++++   kk  +g+    sk hd+  ++lsk+
  OPUNC02G31510.1 143 AFHRIWSTEDEVRILEALAAHRREHG--SLPQTDALIATLAGSLDNTgYGRKELQGKVSTLKRRYESTAKK--KGDL--PSKGHDRRLYDLSKS 230
                      699******************99999..678899**********8653899******************99..5554..5799*********** PP

           DUF573  95 iWgs 98 
                      +Wgs
  OPUNC02G31510.1 231 VWGS 234
                      **95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.1E-21144233IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MAPKRSTPPP PLPLPPPVAS SEETASGSDS EESEEEEESP VAQPAPVVSN KGEESESSGE  60
EESDEEEEEE EEEEEEEDLL RSSATKSRAP PQENRDEEDD SSDEEEGESS ESDKAAPPPL  120
PNPAPKQGAE GNGPKVSSPK RQAFHRIWST EDEVRILEAL AAHRREHGSL PQTDALIATL  180
AGSLDNTGYG RKELQGKVST LKRRYESTAK KKGDLPSKGH DRRLYDLSKS VWGSEAAATA  240
NGTEPREFSQ MCEMYPHLAE EVKVLEAAHP GLFKRDFGRL DDDKAHALDM KIKKQRIAEI  300
SVVLRRGDLT KEVTKVLTEL VE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126100.0CP012610.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 2 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015627254.11e-132probable tyrosine-protein phosphatase DSP2
TrEMBLA0A0E0K5R40.0A0A0E0K5R4_ORYPU; Uncharacterized protein
STRINGOPUNC02G31510.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP67292737
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G11510.12e-09DNA-binding storekeeper protein-related transcriptional regulator