PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OPUNC02G06400.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 493aa MW: 52645.1 Da PI: 9.059 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.7 | 3.7e-11 | 181 | 219 | 3 | 41 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeae 41 + k rr+++NReAAr+sR+RKka+i++Le+ L++ OPUNC02G06400.1 181 DAKTLRRLAQNREAARKSRLRKKAYIQNLETSRIRLSQL 219 67999*************************865555554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 4.4E-8 | 178 | 223 | No hit | No description |
SMART | SM00338 | 1.9E-8 | 179 | 242 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.036 | 181 | 226 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.8E-8 | 182 | 221 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 7.03E-7 | 183 | 226 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 186 | 201 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 1.6E-19 | 268 | 337 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 493 aa Download sequence Send to blast |
MGDRPWQQQL QPHDQQASCS VTAGMMMQAS ATSSNIHGNN IIRKDPGGGY DMAELDHIFL 60 YLNSQDQASA AIQDQPQTLN IFPSQPMHAG EPSPKGSSSM AAINSAPSNN ALAIAAGSSK 120 RPAAAGGQPS RLNNPADQPS ASGKDGKAAV VKKEGGGGGG GKQHGGAAAA ASEHEGPKTP 180 DAKTLRRLAQ NREAARKSRL RKKAYIQNLE TSRIRLSQLE QELVQRSRTQ GAILGGGAFP 240 ASIGGQSPEA AWFDGEYARW VESHERMMAH LRAAVEEEQQ HQHGGVAEAQ LRQLVDAAAA 300 HHGVLVELKA AVASADVFHL VSGTWLPAAE RCFLWIAYRK MVVRHAEPLT EQQAAGVYGV 360 QQSAREREEA LDRDLHTTHR ALSDAVSSDA LLLFPPGAGA GGAAYSDVAM AHLSLAIANL 420 TSLEAFVRQA DALRLQTLYK LPQILTARQS ARCFLAIADH SHRLRALTSL WLSRPRHSDQ 480 LQPPPAAAAR LHP |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | CP012610 | 1e-118 | CP012610.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 2 sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015626935.1 | 0.0 | transcription factor TGAL9-like isoform X1 | ||||
Swissprot | Q0E342 | 0.0 | TGAL9_ORYSJ; Transcription factor TGAL9 | ||||
TrEMBL | A0A0E0JWS6 | 0.0 | A0A0E0JWS6_ORYPU; Uncharacterized protein | ||||
STRING | OPUNC02G06400.1 | 0.0 | (Oryza punctata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2732 | 36 | 69 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06839.3 | 3e-98 | bZIP family protein |
Publications ? help Back to Top | |||
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