PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC01G25080.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 329aa    MW: 34289 Da    PI: 6.4983
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC01G25080.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY84.41e-26148209159
                      ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                      ldDg++WrKYGqK++ g+++pr+Y+rCt++   gC++ k+v+r++ dp +++++Y+g+H++ 
  OPUNC01G25080.1 148 LDDGFSWRKYGQKDILGAKYPRAYFRCTHRhtqGCHASKQVQRADGDPLLFDVVYHGDHTCA 209
                      59***************************98999**************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.2E-28135209IPR003657WRKY domain
SuperFamilySSF1182905.62E-25142209IPR003657WRKY domain
PROSITE profilePS5081121.643143206IPR003657WRKY domain
SMARTSM007742.0E-39148210IPR003657WRKY domain
PfamPF031063.0E-25149208IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009751Biological Processresponse to salicylic acid
GO:0009816Biological Processdefense response to bacterium, incompatible interaction
GO:0010150Biological Processleaf senescence
GO:0010193Biological Processresponse to ozone
GO:0010200Biological Processresponse to chitin
GO:0031347Biological Processregulation of defense response
GO:0042542Biological Processresponse to hydrogen peroxide
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0009507Cellular Componentchloroplast
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MEGLSSDGSR YGGGGRCALV AELVQMQGMV RHLEAEMGPH GGGGGGGGAA AMAAGADDRC  60
RALVSGMLSS IDRSISIARS CCAEAGRLTQ PAGAAPESPP SADGSAGSDH GADSRCRANA  120
AGPCKKRKTL PKWSKQVRVS SVQDVGPLDD GFSWRKYGQK DILGAKYPRA YFRCTHRHTQ  180
GCHASKQVQR ADGDPLLFDV VYHGDHTCAQ GARSAVVVDG QTAASAEQQQ QPPPPPPQPA  240
GQPQEQNAVS VAFTSTAVNG SSLSPFMSPA TSDCQVSYEL GGGSMAGVRN VPDVELASKT  300
NSSMGDDMDF MFSLDADFLD NYKYSSSYF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A4e-21145208568OsWRKY45
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY6769260.0AY676926.1 Oryza sativa (indica cultivar-group) transcription factor WRKY98 (WRKY98) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015632319.10.0probable WRKY transcription factor 53
TrEMBLA0A0E0JLX90.0A0A0E0JLX9_ORYPU; Uncharacterized protein
STRINGOPUNC01G25080.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP33553183
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.25e-40WRKY family protein