PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC01G05450.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 206aa    MW: 21765.3 Da    PI: 7.2152
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC01G05450.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.48.1e-3098156159
                      ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      ldDg++WrKYG+K vk+s++pr+YYrC+ agC vkk+ver+ +dp++v++tY g Hnh 
  OPUNC01G05450.1  98 LDDGFKWRKYGKKAVKSSPNPRNYYRCSAAGCGVKKRVERDGDDPRYVVTTYDGVHNHA 156
                      59********************************************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.5E-3185158IPR003657WRKY domain
SuperFamilySSF1182903.27E-2790158IPR003657WRKY domain
PROSITE profilePS5081131.08993158IPR003657WRKY domain
SMARTSM007741.3E-3398157IPR003657WRKY domain
PfamPF031061.6E-2399155IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    Send to blast
MAASLGLCHE TSYAYSYPAL NTSSSLCFPP LMADHIVDGG GCSFGDFLEL GHSEYSLPLL  60
PPPPVVMAGG NNDQYGMSSS ATTTSRIGFR TRSEVEVLDD GFKWRKYGKK AVKSSPNPRN  120
YYRCSAAGCG VKKRVERDGD DPRYVVTTYD GVHNHATPGG VVGHLPYPPS AAPAWSVPAV  180
ASPPTAQAWG APLHAAAAAH SSESSF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-2688158777Probable WRKY transcription factor 4
2lex_A1e-2688158777Probable WRKY transcription factor 4
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCT8312870.0CT831287.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI020N10, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015633261.11e-93probable WRKY transcription factor 50
TrEMBLA0A0E0JF091e-149A0A0E0JF09_ORYPU; Uncharacterized protein
STRINGOPUNC01G05450.11e-150(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44137206
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.11e-38WRKY DNA-binding protein 50