PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OBART06G27730.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 139aa MW: 15040.8 Da PI: 4.9776 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 40.8 | 4.7e-13 | 93 | 124 | 3 | 34 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeek 34 +++r++r+++NRe+A rsR+RK+a++eeLe++ OBART06G27730.1 93 DDRRTIRMMRNRESALRSRARKRAYVEELEKE 124 589**************************975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50217 | 8.554 | 93 | 124 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.2E-9 | 94 | 124 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.05E-8 | 95 | 129 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.7E-9 | 95 | 124 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 139 aa Download sequence Send to blast |
MANYHHQEYY QMAAAAVAWP REPDSPQLSI MSGCSSLFSI STLRDDDDGG VRLAGAALPA 60 TPVSLAGIAG GASTPGGDEV DMEVRQQSGG SGDDRRTIRM MRNRESALRS RARKRAYVEE 120 LEKEGSGMRE DIVCRCMAD |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | CT834745 | 0.0 | CT834745.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA103J07, full insert sequence. | |||
GenBank | CT834747 | 0.0 | CT834747.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA126G01, full insert sequence. | |||
GenBank | CT834748 | 0.0 | CT834748.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA223H09, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015642449.1 | 2e-78 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 | ||||
Refseq | XP_015643092.1 | 2e-78 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 | ||||
Refseq | XP_015643093.1 | 2e-78 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 | ||||
Refseq | XP_015643094.1 | 2e-78 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 | ||||
Refseq | XP_015643106.1 | 2e-78 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 | ||||
Refseq | XP_015643107.1 | 2e-78 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 | ||||
TrEMBL | A0A0D3GKY3 | 1e-96 | A0A0D3GKY3_9ORYZ; Uncharacterized protein | ||||
STRING | OBART06G27730.1 | 2e-97 | (Oryza barthii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4017 | 30 | 72 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G45249.1 | 7e-09 | abscisic acid responsive elements-binding factor 2 |