PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf15279g00002.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 328aa MW: 37826.8 Da PI: 4.2937 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 80.4 | 4e-25 | 12 | 142 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvka..eekewyfFskrdkkyatgkrknratksgy 82 p+G+rFhPt+ e++ +yL v++++l+ ++ ++ +d+y ePw++ +++++ +++ yf ++++k+++t kr +r++ +g+ Niben101Scf15279g00002.1 12 PVGYRFHPTNREVL-RYLIGFVRDEPLPSQNElMQVADLYADkEPWQIFEAYDQenNNNTRYFITPQKKEKPTWKRVSRTVGKGT 95 89**********99.9**********88877747777*997559****7433331144467************************ PP NAM 83 WkatgkdkevlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128 Wk +gk +ev++ kg+l+g k+L + +++++ ++ +W+m ey+l Niben101Scf15279g00002.1 96 WKPQGKGREVFDDKGRLMGYVKSLKYIpANKSSNNVNGEWLMTEYSL 142 ***************************656888889*********97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.03E-28 | 8 | 165 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 28.851 | 11 | 165 | IPR003441 | NAC domain |
Pfam | PF02365 | 9.6E-13 | 12 | 142 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 328 aa Download sequence Send to blast |
MEYSQAKCFS GPVGYRFHPT NREVLRYLIG FVRDEPLPSQ NELMQVADLY ADKEPWQIFE 60 AYDQENNNNT RYFITPQKKE KPTWKRVSRT VGKGTWKPQG KGREVFDDKG RLMGYVKSLK 120 YIPANKSSNN VNGEWLMTEY SLFDRYLPAR EIKNKGFVIC KIKKKGKPGD KIKGNNIDEV 180 VNDENIRDIE EFIDTVLQED VQVEDNGIRS NGIEKDDQEN NIIQYAEGDQ VRDHVLGLLD 240 SPEDTVDVND HEEYVEDCVD EGDEVQVHLL EGYIDSVLQS EDVQAEHNGM MSSNGIIAKD 300 DEENMEYQVE DNQPATFWAS AEDDIFAR |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009762991.1 | 0.0 | PREDICTED: NAC domain-containing protein 78-like | ||||
TrEMBL | A0A1J6JUZ1 | 0.0 | A0A1J6JUZ1_NICAT; Nac domain-containing protein 43 | ||||
STRING | XP_009762991.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1024 | 13 | 85 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14000.1 | 4e-16 | NAC domain containing protein 84 |