PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf12714g00012.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 241aa MW: 27625.4 Da PI: 5.2636 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 74.5 | 2.5e-23 | 12 | 138 | 3 | 127 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWk 84 +G+rFhPt+ el+ ++Lkk ++g++l+ e ++ +di+ Pw++ ++ + eek yfFs+ +k++++ +r +r+ ++g+Wk Niben101Scf12714g00012.1 12 MGVRFHPTEAELI-NFLKKFLKGEPLPSECPnFQLADICGDqPPWEIFgASNHPEEKVRYFFSRLKKQKSEHTRVRRTCANGTWK 95 7************.9**********88755559999***87368***733333355677************************** PP NAM 85 atgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 + ++++ kg+++g ++ + f + +++ ++ W+m+ey Niben101Scf12714g00012.1 96 GQTCVDPIKNGKGTVIGFRRCFKFQSTTKEGESNKIWLMKEYF 138 *************************88888888999******6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.96E-27 | 9 | 161 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 25.844 | 10 | 162 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.2E-15 | 12 | 137 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence Send to blast |
MSTVAAARRR IMGVRFHPTE AELINFLKKF LKGEPLPSEC PNFQLADICG DQPPWEIFGA 60 SNHPEEKVRY FFSRLKKQKS EHTRVRRTCA NGTWKGQTCV DPIKNGKGTV IGFRRCFKFQ 120 STTKEGESNK IWLMKEYFVG DDFFRENNIP KEDIVVCRIK KNTRSEKNRG VNMEEQDVAN 180 VMEVILHGPD EDYCTTVQPA TICEAAENQV MDEAQKMNEE EINSADDVLL DIDDFGDIIC 240 C |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009789986.1 | 1e-155 | PREDICTED: NAC domain-containing protein 78-like | ||||
Refseq | XP_016490087.1 | 1e-155 | PREDICTED: NAC domain-containing protein 78-like | ||||
TrEMBL | A0A1S4BMM2 | 1e-154 | A0A1S4BMM2_TOBAC; NAC domain-containing protein 78-like | ||||
TrEMBL | A0A1U7XK54 | 1e-154 | A0A1U7XK54_NICSY; NAC domain-containing protein 78-like | ||||
STRING | XP_009789986.1 | 1e-155 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA814 | 13 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04410.1 | 5e-14 | NAC domain containing protein 2 |