PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf07162g03025.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 259aa MW: 30498.7 Da PI: 8.1217 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 69 | 1.3e-21 | 13 | 141 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLp.kkvka.eekewyfFskrdkkyatgkrknratksgyW 83 +G+rFhPt+ el+ ++Lk+ ++g+ l+ e ++ +diy Pw++ ++ + eek y F++ +k++++ +r +r+ ++g+W Niben101Scf07162g03025.1 13 MGVRFHPTEAELI-NFLKRFLKGELLPSECPnFQLADIYGDqPPWEIFgANSGHpEEKVRYIFTRLKKQKNEYTRVRRTCANGTW 96 7************.9*********977755459999***87368***7333323255566************************* PP NAM 84 katgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 k + ++++ kg++vg ++ + f + ++++ ++ W+m ey++ Niben101Scf07162g03025.1 97 KGQTGIDPIKNGKGTVVGFRRYFKFQSRSKEREHNKIWLMREYSV 141 *888889****9**************99999999*********86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.62E-26 | 3 | 163 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 25.988 | 11 | 164 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.8E-14 | 13 | 141 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence Send to blast |
MSMVPAVRRR CIMGVRFHPT EAELINFLKR FLKGELLPSE CPNFQLADIY GDQPPWEIFG 60 ANSGHPEEKV RYIFTRLKKQ KNEYTRVRRT CANGTWKGQT GIDPIKNGKG TVVGFRRYFK 120 FQSRSKEREH NKIWLMREYS VGDDFFRENN IPKEDIVVCR IKKNIRSKKI HGVNMEKQDV 180 PKTIEAMLHE TNEDYCTTVQ TATICQAADQ HQVMHETQKM NEYNNYSNII NDYSNYQQEE 240 VNWADDMLIG IDEFGDIIW |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009591317.2 | 1e-162 | PREDICTED: NAC domain-containing protein 78-like | ||||
TrEMBL | B3VK72 | 1e-157 | B3VK72_TOBAC; NAC transcription factor | ||||
STRING | XP_009591317.1 | 1e-161 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA814 | 13 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04410.1 | 5e-14 | NAC domain containing protein 2 |