PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf02904g00012.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 200aa MW: 22554.3 Da PI: 4.8163 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 46.9 | 9e-15 | 7 | 116 | 11 | 128 |
NAM 11 deelvveyLkkkvegkkleleevikevdiy.kvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 +e+l+ yL+k v g ++e + i+++d y + +P +L ++ + yfF++ +kk+ nr +t g Wk ++k+v Niben101Scf02904g00012.1 7 EEDLI-SYLQKFVCGMPIES-DGIRHIDGYgNKKPCELF----QNGEVNYFFTQLKKKS-----DNRsITGGGSWKGRDTSKPVR 80 67888.9***********99.78****7662679****6....245667****999875.....4565999************** PP NAM 94 skkgelvglkktLvfykg.rapkgektdWvmheyrl 128 +k+g+++glkk++ f + + ++ W m+ey l Niben101Scf02904g00012.1 81 DKEGSVIGLKKSFRFDEDiVIGSNQRIVWSMNEYCL 116 ***************975455666899*******87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 21.307 | 1 | 143 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.5E-9 | 6 | 116 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 4.32E-14 | 7 | 142 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence Send to blast |
MFQAYNEEDL ISYLQKFVCG MPIESDGIRH IDGYGNKKPC ELFQNGEVNY FFTQLKKKSD 60 NRSITGGGSW KGRDTSKPVR DKEGSVIGLK KSFRFDEDIV IGSNQRIVWS MNEYCLTDAT 120 LEVLRKHGQI RNEDSVLCSI EKKVSLCTIS QGIPTSSSAP IYCGSSLYTE LPPFDGPFES 180 LTEEELAFFD NPDPQAYTNK |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009772253.1 | 1e-108 | PREDICTED: NAC domain-containing protein 2-like | ||||
Refseq | XP_016500359.1 | 1e-108 | PREDICTED: NAC domain-containing protein 2-like | ||||
TrEMBL | A0A1S4CH84 | 1e-107 | A0A1S4CH84_TOBAC; NAC domain-containing protein 2-like | ||||
TrEMBL | A0A1U7W0W1 | 1e-107 | A0A1U7W0W1_NICSY; NAC domain-containing protein 2-like | ||||
STRING | XP_009772253.1 | 1e-107 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3381 | 10 | 41 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04410.1 | 3e-10 | NAC domain containing protein 2 |