PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf01218g01003.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 154aa MW: 17998.7 Da PI: 10.213 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 56.1 | 1.2e-17 | 12 | 116 | 3 | 104 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLp.kkvka.eekewyfFskrdkkyatgkrknratksgyW 83 +G+rFhPt+ el+ ++Lk+ ++g++l+ e +++vdiy Pw++ ++ ++ eek yf ++ +k++++ +r +r+ ++g+W Niben101Scf01218g01003.1 12 MGVRFHPTEAELI-NFLKRFLKGEPLPSECPnFRHVDIYGDqPPWEIFgTNSDHpEEKVRYFLTRLKKQKSEYTRVRRTCANGTW 95 7************.9**********8875556*******87368***7333333244455999999999999************* PP NAM 84 katgkdkevlskkgelvglkk 104 k + k +v++ kg++vg ++ Niben101Scf01218g01003.1 96 KVQTKGFPVKNGKGTVVGFRR 116 ***********9999999987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 16.464 | 10 | 154 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 8.5E-18 | 10 | 119 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.3E-8 | 12 | 116 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 154 aa Download sequence Send to blast |
MSSLPVHREC IMGVRFHPTE AELINFLKRF LKGEPLPSEC PNFRHVDIYG DQPPWEIFGT 60 NSDHPEEKVR YFLTRLKKQK SEYTRVRRTC ANGTWKVQTK GFPVKNGKGT VVGFRRGYCS 120 LPNQEEQKIR EKLWGKYGGT RCCQRGRSYV AWTL |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009801092.1 | 3e-72 | PREDICTED: NAC domain-containing protein 90-like | ||||
Refseq | XP_016510918.1 | 3e-72 | PREDICTED: NAC domain-containing protein 53-like | ||||
TrEMBL | A0A1S4DC45 | 8e-71 | A0A1S4DC45_TOBAC; NAC domain-containing protein 53-like | ||||
TrEMBL | A0A1U7YAE3 | 8e-71 | A0A1U7YAE3_NICSY; NAC domain-containing protein 90-like | ||||
STRING | XP_009801092.1 | 1e-71 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA814 | 13 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04410.1 | 5e-09 | NAC domain containing protein 2 |