PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf00077g08013.1
Organism
Nicotiana benthamiana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 812aa    MW: 87187.4 Da    PI: 5.9855
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf00077g08013.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.65.6e-13340400262
                               XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                               ++ k+  r+++NRe+A+ sRqRKk ++eeLe+kv  + +  ++L  +++ +  e a+lk++
  Niben101Scf00077g08013.1 340 EDEKKRARLIRNRESAQLSRQRKKHYVEELEDKVRIMHSTIQDLNAKISYIIVENATLKTQ 400
                               5678999**************************************9999998888888876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.5E-15339403IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.162341401IPR004827Basic-leucine zipper domain
PfamPF001702.1E-11342400IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.3E-15343401No hitNo description
SuperFamilySSF579596.88E-12343401No hitNo description
CDDcd147042.81E-19344395No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 812 aa     Download sequence    Send to blast
MAGPILADPP PSEAANPTGE FDGLPIPPLD PTYFAQHITA ADQGKIDGFP MELPEGDEFM  60
LDDLDFDLSF DDIFLNNSDA VINPDFLADC LGSDPNRVDP SCYGLPGNQL MGNFDNSSGE  120
EPPGAKFVPA DLNCFGQPGS QLVRDFDDSS RYFKSTSAEF GNFSGNQAAG GVMVIDTSSP  180
ELRQSSSGSD VLNATSSTSS HQVSGDVAGY LNVPSPESNG SNHEGSRESA NDNKGLGDAR  240
VLNCHSPESQ DSGNFCSNVS EGLNYPSDSN KSVHSSPNFG NNSIKNGAVE EIIKLDGVNA  300
NTSNCSSLLK RKKSREDSNS ISIHQKLTTV ALSENLNNDE DEKKRARLIR NRESAQLSRQ  360
RKKHYVEELE DKVRIMHSTI QDLNAKISYI IVENATLKTQ LGGAGIPSQV PPPPPGMYPH  420
HPVMYPWMPY TPPYMVKPQG SQVPLVPIPK LKPQGAAPAP KSSKKVEKKR TEVKTKKVAS  480
VSFLGLLFFM LLFGWLVPLL NVRYGGMREP FMSGDSFGSG FYDKHHGRVL AVDGPVNGTG  540
HSGKYSGKDY SSHCGRRGQE ESAQPNVNGS DPLAASLYVP RNDKLVKIDG NLIIHSVLAS  600
EKAMASHGGA DKNNTETGLA IPGDLAPAIA GSHPHLYRSP AVGQRALGTG EENGKSTVQQ  660
WFLEGVAGPL LSSGMCTEVF QFDVSSSAPG AVVPATNARN LSMEERQNVT HVHKVRNRRI  720
LNGPSVSLSR PSHNISEEQT GKQENFSGNK SLSSMVVSVL VDPREAGDGD VDGMMGPKSL  780
SRIFVVVLID SVKYVTYSCM LPFKGSVPLV TT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1705718RQNVTHVHKVRNRR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019265649.10.0PREDICTED: bZIP transcription factor 17-like
TrEMBLA0A1B1FBS40.0A0A1B1FBS4_NICBE; BZIP28 protein
STRINGXP_009610632.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30292450
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40950.11e-126bZIP family protein