PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.N00371.1.p

Common Name

MIMGU_mgv1a022092mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

NAC

Protein Properties

Length: 449aa MW: 50934.8 Da PI: 4.9051

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.N00371.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	143	1.7e-44	35	160	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 ppG+rF P+d el+v+yL+ k+++ +++l + i++v++y+++P+ L ++ + +ekewyfF++rd+ky++g+r++r++ +gyWkatg+dk + Migut.N00371.1.p 35 PPGYRFVPKDAELIVDYLEVKIKNLPIPL-DEINDVHLYEHHPQFLAdNNPQLGEKEWYFFTPRDRKYQNGQRPSRSAGNGYWKATGSDKVIS 126 9**************************.77**********866777799*******************************999 PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s +g+ vg kk+Lv+++g+ p g kt+W+mhey++ Migut.N00371.1.p 127 S-GGKIVGYKKSLVYHEGKPPAGIKTNWIMHEYKV 160 9.9****************************86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.57E-52	30	186	IPR003441	NAC domain
PROSITE profile	PS51005	50.798	34	186	IPR003441	NAC domain
Pfam	PF02365	5.0E-23	35	159	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence Send to blast
MDNQAYIAPK SEKMESCSTS GEAVIPAADD KPKYPPGYRF VPKDAELIVD YLEVKIKNLP 60 IPLDEINDVH LYEHHPQFLA DNNPQLGEKE WYFFTPRDRK YQNGQRPSRS AGNGYWKATG 120 SDKVISSGGK IVGYKKSLVY HEGKPPAGIK TNWIMHEYKV NQPGRAKTCP TDMRLDDWVL 180 CRLYIKSERA NNKRKRGDET AQLVKEEDEE NNENQEDQEG EEAAETNSGN EDQEAAETNP 240 GNYNEHATIG SNEYANNICY IEYPNNICYN GFGETINNTD TLLFDPVSPF CTNIEDHLVD 300 TPPQVYNLPP SSTFPDYPQV YNLPPSSTFP DYRNDSPVLS DNYNRPPHYI QPPAQVYFEN 360 HRSVHMPYDI DYPRYQFMET PGTFQNSHGN QGISHGNQGI YERAPSSFGS SSLPSTCTTG 420 ASDPTAKPQD NCNYHPDYNQ SMPRKRRH*

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence Send to blast

MDNQAYIAPK SEKMESCSTS GEAVIPAADD KPKYPPGYRF VPKDAELIVD YLEVKIKNLP  60
IPLDEINDVH LYEHHPQFLA DNNPQLGEKE WYFFTPRDRK YQNGQRPSRS AGNGYWKATG  120
SDKVISSGGK IVGYKKSLVY HEGKPPAGIK TNWIMHEYKV NQPGRAKTCP TDMRLDDWVL  180
CRLYIKSERA NNKRKRGDET AQLVKEEDEE NNENQEDQEG EEAAETNSGN EDQEAAETNP  240
GNYNEHATIG SNEYANNICY IEYPNNICYN GFGETINNTD TLLFDPVSPF CTNIEDHLVD  300
TPPQVYNLPP SSTFPDYPQV YNLPPSSTFP DYRNDSPVLS DNYNRPPHYI QPPAQVYFEN  360
HRSVHMPYDI DYPRYQFMET PGTFQNSHGN QGISHGNQGI YERAPSSFGS SSLPSTCTTG  420
ASDPTAKPQD NCNYHPDYNQ SMPRKRRH*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	1e-51	35	192	18	171	NO APICAL MERISTEM PROTEIN
1ut4_B	1e-51	35	192	18	171	NO APICAL MERISTEM PROTEIN
1ut7_A	1e-51	35	192	18	171	NO APICAL MERISTEM PROTEIN
1ut7_B	1e-51	35	192	18	171	NO APICAL MERISTEM PROTEIN
3swm_A	1e-51	35	192	21	174	NAC domain-containing protein 19
3swm_B	1e-51	35	192	21	174	NAC domain-containing protein 19
3swm_C	1e-51	35	192	21	174	NAC domain-containing protein 19
3swm_D	1e-51	35	192	21	174	NAC domain-containing protein 19
3swp_A	1e-51	35	192	21	174	NAC domain-containing protein 19
3swp_B	1e-51	35	192	21	174	NAC domain-containing protein 19
3swp_C	1e-51	35	192	21	174	NAC domain-containing protein 19
3swp_D	1e-51	35	192	21	174	NAC domain-containing protein 19
4dul_A	1e-51	35	192	18	171	NAC domain-containing protein 19
4dul_B	1e-51	35	192	18	171	NAC domain-containing protein 19
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.N00371.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012843133.1	0.0	PREDICTED: protein FEZ-like
TrEMBL	A0A022QYK4	0.0	A0A022QYK4_ERYGU; Uncharacterized protein
STRING	Migut.N00371.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA746	24	103

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52890.1	2e-52	NAC domain containing protein 19

Link Out ? help Back to Top
Phytozome	Migut.N00371.1.p