PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N00370.1.p
Common NameMIMGU_mgv1a020617mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 489aa    MW: 55507.9 Da    PI: 5.762
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N00370.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM143.61.1e-44301552128
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                       ppG+rF P+d el+v+yL+ k+++ +++l + i+ev++y+++P+ L  ++ + +ekewyfF++rd+ky++g+r++r++ +gyWkatg+dk + 
  Migut.N00370.1.p  30 PPGYRFVPKDVELIVDYLEVKIKNLPIPL-NEINEVHLYEHHPQFLAdNNPQLGEKEWYFFTPRDRKYQNGQRPSRSAGNGYWKATGSDKVIS 121
                       9****************************.67**************866777799***********************************999 PP

               NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       s +g+ vg kk+Lv+++g+ap g kt+W+mhey++
  Migut.N00370.1.p 122 S-GGKIVGYKKSLVYHEGKAPAGIKTNWIMHEYKV 155
                       9.9******************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.57E-5225181IPR003441NAC domain
PROSITE profilePS5100550.83429181IPR003441NAC domain
PfamPF023659.8E-2330154IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 489 aa     Download sequence    Send to blast
MDNQAYVAPK SCSISGEAVI PAADDKPKYP PGYRFVPKDV ELIVDYLEVK IKNLPIPLNE  60
INEVHLYEHH PQFLADNNPQ LGEKEWYFFT PRDRKYQNGQ RPSRSAGNGY WKATGSDKVI  120
SSGGKIVGYK KSLVYHEGKA PAGIKTNWIM HEYKVNQPGR AKTCPTDMRL DDWVLCRLYI  180
KSERANNKRK RGDETAQLVK EEDEEINENQ ENQEGEEAAE TNFGNEDQEA AETNSGNYNE  240
HATIGSNEYA NNICYNECPN NICYNEFAET INNTDTLLFD LVSPFCTNIK DHLVDTPPQV  300
YNLPPSSTFP DYRNDSPVLS DNYNRPPHYI QPPAINYTAL PHNQNHHTTT DHNYDYITAQ  360
REMFGVSPSR QVYFENHRSV HMPYNIDCPR YQFMETPGTF QNSHGNIPSP HIQNQGNIPS  420
PHIQNQGNIP SPHIQNQGIY ERAPSSFGSS SLPSTSTTGA SDPTVKPQDN CNDHPDYNQS  480
MPRKRHQQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A9e-533018718171NO APICAL MERISTEM PROTEIN
1ut4_B9e-533018718171NO APICAL MERISTEM PROTEIN
1ut7_A9e-533018718171NO APICAL MERISTEM PROTEIN
1ut7_B9e-533018718171NO APICAL MERISTEM PROTEIN
3swm_A1e-523018721174NAC domain-containing protein 19
3swm_B1e-523018721174NAC domain-containing protein 19
3swm_C1e-523018721174NAC domain-containing protein 19
3swm_D1e-523018721174NAC domain-containing protein 19
3swp_A1e-523018721174NAC domain-containing protein 19
3swp_B1e-523018721174NAC domain-containing protein 19
3swp_C1e-523018721174NAC domain-containing protein 19
3swp_D1e-523018721174NAC domain-containing protein 19
4dul_A9e-533018718171NAC domain-containing protein 19
4dul_B9e-533018718171NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N00370.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012843133.10.0PREDICTED: protein FEZ-like
TrEMBLA0A022QVB40.0A0A022QVB4_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.N00370.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA74624103
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52890.13e-53NAC domain containing protein 19