PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.M01679.1.p | ||||||||
Common Name | MIMGU_mgv1a003822mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | WRKY | ||||||||
Protein Properties | Length: 564aa MW: 61590.9 Da PI: 7.73 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.7 | 7.4e-31 | 211 | 268 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK vkgsefprsYY+Ct+++C+vkk ers ++++ei+Y+g+H+h+k Migut.M01679.1.p 211 EDGYNWRKYGQKLVKGSEFPRSYYKCTYPNCEVKKIFERSP-SGQITEIVYKGSHDHPK 268 7****************************************.9**************85 PP | |||||||
2 | WRKY | 105.3 | 3.3e-33 | 380 | 438 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct gCpv+k+ver+++dpk+v++tYeg+Hnh+ Migut.M01679.1.p 380 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNVGCPVRKHVERASHDPKAVITTYEGKHNHD 438 59********************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.2E-26 | 197 | 269 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.96E-24 | 203 | 269 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 22.619 | 205 | 269 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.3E-32 | 210 | 268 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.9E-23 | 211 | 267 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 2.6E-37 | 365 | 440 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.88E-29 | 372 | 440 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 38.549 | 375 | 440 | IPR003657 | WRKY domain |
SMART | SM00774 | 5.3E-39 | 380 | 439 | IPR003657 | WRKY domain |
Pfam | PF03106 | 9.1E-26 | 381 | 438 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009611 | Biological Process | response to wounding | ||||
GO:0009961 | Biological Process | response to 1-aminocyclopropane-1-carboxylic acid | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 564 aa Download sequence Send to blast |
MEDAHSSYSH YQHHSPPSSN NADAVGSING AKYRLMSPAK LPISRSTSIT IPPGLSPTSF 60 LDSPVLLSNI KAEPSPTTGS FFKPHLMQGS GENAALSLEK FFSGRKAVDE KTSSSFEFRF 120 QTGASSTSGL SSAGLSFHVG MNRQGPVVYQ DQHNSQPPVP SQSVVVGAHN SPIRNSIDEL 180 NQGGQSNTGN RTSSSEHKDS ISTVSNERTS EDGYNWRKYG QKLVKGSEFP RSYYKCTYPN 240 CEVKKIFERS PSGQITEIVY KGSHDHPKPQ PARRQNSGAL LSIQEDKPDK DLLFTGQEDK 300 LNNNKMEQNA SPMLSPLQTN EDNVDVSVSQ YPGLNDDVEE DDPFLKRSRK MEEGIDATPV 360 VKPIREPRVV VQTLSEVDIL DDGYRWRKYG QKVVRGNPNP RSYYKCTNVG CPVRKHVERA 420 SHDPKAVITT YEGKHNHDVP TAKNNNNNNN NNNNNNISSH DFSAQYAGAN SKLRPPQDSS 480 SGNGSISLDL GVGIGREAMD AEEGRGQIGN PASAAAQIPA YYGIVNMYGN RDNLVEGRSS 540 FQAPPMHPSN QCPPSLGRIL MGP* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 8e-37 | 201 | 440 | 8 | 77 | Probable WRKY transcription factor 4 |
2lex_A | 8e-37 | 201 | 440 | 8 | 77 | Probable WRKY transcription factor 4 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00455 | DAP | Transfer from AT4G26640 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.M01679.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012848779.1 | 0.0 | PREDICTED: probable WRKY transcription factor 20 isoform X1 | ||||
TrEMBL | A0A022QFE3 | 0.0 | A0A022QFE3_ERYGU; Uncharacterized protein | ||||
STRING | Migut.M01679.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4025 | 23 | 44 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G26640.2 | 1e-144 | WRKY family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.M01679.1.p |