PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.L01720.1.p

Common Name

MIMGU_mgv1a027111mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

C2H2

Protein Properties

Length: 276aa MW: 29460.3 Da PI: 8.0345

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.L01720.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14	0.00015	97	119	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+ksFs+ L H +H Migut.L01720.1.p 97 YQCKTCSKSFSSFQALGGHRASH 119 9***********99999998887 PP
2	zf-C2H2	12.1	0.0006	180	202	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F + L H+r+H Migut.L01720.1.p 180 HECSICGAEFASGQALGGHMRRH 202 78********************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13912	4.3E-12	96	121	IPR007087	Zinc finger, C2H2
SuperFamily	SSF57667	8.67E-10	96	119	No hit	No description
SMART	SM00355	0.044	97	119	IPR015880	Zinc finger, C2H2-like
PROSITE profile	PS50157	10.097	97	119	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	99	119	IPR007087	Zinc finger, C2H2
SuperFamily	SSF57667	8.67E-10	175	202	No hit	No description
Pfam	PF13912	7.5E-13	179	204	IPR007087	Zinc finger, C2H2
SMART	SM00355	0.016	180	202	IPR015880	Zinc finger, C2H2-like
PROSITE profile	PS50157	9.577	180	202	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	182	202	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence Send to blast
MQLAQEEVIF IKGKRSKRSI RAASPLALTM AATSSSTTAD SSGAGVVISD ISGSCDRDSS 60 DHQEEEDMAN CLMLLAGGQI QKPPPSAAAA AAAVEVYQCK TCSKSFSSFQ ALGGHRASHK 120 RPIKPQTLDH EIKKPPPLKQ YRPQEISYSP SNPCADDSSI ILSLQITGGG LRSKTTIRVH 180 ECSICGAEFA SGQALGGHMR RHRPIPTAAA ATSNISHGGG ESQEMKRPRN NLLSLDLNLP 240 APEDHDHRDS KFPFAPKEQI IVFSSTSPMV VDCHY*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.L01720.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012835859.1	0.0	PREDICTED: zinc finger protein ZAT5
TrEMBL	A0A022REZ0	0.0	A0A022REZ0_ERYGU; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1262	24	80

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03510.1	3e-47	C2H2 family protein

Link Out ? help Back to Top
Phytozome	Migut.L01720.1.p