PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L01490.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family GATA
Protein Properties Length: 178aa    MW: 18946.7 Da    PI: 10.3936
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L01490.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.54.5e-192861134
              GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
                      C+ C ttkTplWR+gp g+k+LCnaCG+++rk +
  Migut.L01490.1.p 28 CADCSTTKTPLWRSGPKGPKSLCNACGIRQRKAR 61
                      *******************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF577166.18E-132161No hitNo description
PROSITE profilePS5011412.6772258IPR000679Zinc finger, GATA-type
SMARTSM004014.2E-192273IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.104.1E-162661IPR013088Zinc finger, NHR/GATA-type
CDDcd002022.75E-132759No hitNo description
PROSITE patternPS0034402853IPR000679Zinc finger, GATA-type
PfamPF003208.1E-172861IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    Send to blast
MQPYNNNNSS SSMENDHHLI SSSPIRVCAD CSTTKTPLWR SGPKGPKSLC NACGIRQRKA  60
RRAVAAAAAA AASAASGVVA DPPTPPAKMI KVQHKEKIGK SATNSSLMKK RCKTTTPVDA  120
DSSLTDESSN KKKKIGNKLE EFLINLSKNL SFHRMFPEDE KDAAILLMAL SSGLVHG*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L01490.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012848016.11e-118PREDICTED: putative GATA transcription factor 22
TrEMBLA0A022QI861e-117A0A022QI86_ERYGU; Uncharacterized protein
STRINGMigut.L01490.1.p1e-128(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30972249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.17e-26cytokinin-responsive gata factor 1