PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.K01467.1.p

Common Name

LOC105960890, MIMGU_mgv1a012248mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

C2H2

Protein Properties

Length: 257aa MW: 29199.2 Da PI: 8.6702

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.K01467.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.1	0.00029	96	118	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C+ C+++++++ +L H + H Migut.K01467.1.p 96 SCSVCTRVYPTSRLLSIHVSEaH 118 6*****************99877 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00355	0.19	68	93	IPR015880	Zinc finger, C2H2-like
PROSITE pattern	PS00028	0	70	93	IPR007087	Zinc finger, C2H2
SMART	SM00355	6.4	95	118	IPR015880	Zinc finger, C2H2-like
PROSITE pattern	PS00028	0	97	118	IPR007087	Zinc finger, C2H2
SMART	SM00355	0.35	133	158	IPR015880	Zinc finger, C2H2-like
PROSITE pattern	PS00028	0	135	158	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 257 aa Download sequence Send to blast
MAMVVEESGA EVKFPCWKPV RRRFLPEAPF FAAGNIEREL LAKQVAVDLT QEEKQLMRDV 60 EDWGSSEVYC PIVGCGARLK SLDDFEDHYK ARHMASCSVC TRVYPTSRLL SIHVSEAHDS 120 FFKAKVARGF DMYECLVEGC DAKLKNYKSR QQHLIDKHKF PVSFEFFKKA KLSKKQRHKV 180 QQKKAMHTDT EESSTSAMQV DEEEMDNLVS SVSRLSTSDS PSAISFGRRH TRGLAFVPRA 240 VQKERNPGTS VDQNNR*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.K01467.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012840555.1	0.0	PREDICTED: zinc finger protein 511
TrEMBL	A0A022R3L3	0.0	A0A022R3L3_ERYGU; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA10211	20	22

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14140.1	1e-104	zinc ion binding;nucleic acid binding;zinc ion binding

Link Out ? help Back to Top
Phytozome	Migut.K01467.1.p
Entrez Gene	105960890