PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.K00040.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 754aa    MW: 83658.6 Da    PI: 9.9156
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.K00040.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.21.4e-111870348
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.......TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmg.......kgRtlkqcksrwqkyl 48
                      +W t+E++ll+ av+++G+++W++Ia+++        + +t+ +c+s++++++
  Migut.K00040.1.p 18 SWGTWEELLLAFAVNRHGTDSWDSIASELHkrtsgsaLSLTAQNCRSKYFDLK 70
                      7************************************************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007170.00111572IPR001005SANT/Myb domain
SuperFamilySSF466891.39E-51772IPR009057Homeodomain-like
PfamPF002491.6E-101770IPR001005SANT/Myb domain
CDDcd001671.21E-41870No hitNo description
PROSITE profilePS500906.0751870IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.605.2E-41965IPR009057Homeodomain-like
Gene3DG3DSA:1.20.920.103.1E-13312421IPR001487Bromodomain
SMARTSM002973.7E-10314423IPR001487Bromodomain
SuperFamilySSF473703.27E-14315420IPR001487Bromodomain
PfamPF004394.8E-9330408IPR001487Bromodomain
PROSITE profilePS5001411.105333404IPR001487Bromodomain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 754 aa     Download sequence    Send to blast
MTKPDGVAPE SKADVTPSWG TWEELLLAFA VNRHGTDSWD SIASELHKRT SGSALSLTAQ  60
NCRSKYFDLK RRFVAPNGDL EEDDSRDGKS DSAPLLEELR KLRVAELRRE VQRYDLNIES  120
LELKKKKLEE ERERSLRREK IDSDLGEGDE KIGMEPEMEP AAGGEPVTGD DLEKDDLSVN  180
ESNSTDPGLE KSIAGEKEPE PGRTGGEEVR RDQTGQTTEL KPEPNQKAVR EDSCNGSSNS  240
IDESDRKAKA EPVTDSTDLV ESEAESDGGR EEATKENSDV QSSASRSRKE EGSDKVRRGN  300
MSGDEREHED QSRAVKELSA ESQPLADFLQ AIRAHKLGSV FERRLRSQET SKYNKLILQH  360
TDLETIETRL KEGWYSGSTS KFFRDLLLLV NNALVFFSKN SAEANAATEI RWLVSKQISR  420
KLTKSDSSSG KQISLQSLSI AKKEDKTPEP SQSLTLKPRL SGSLIVCRKR SSIAAKGSAS  480
SSGADKKKEQ TPLVTEEKDK AKVVQRSSQV SGDAEEPKIT KKRTRDNRFS SVSANNSKKN  540
NGKNSSANKN ESGKQPAKGG GSSSSQQAEP PKSETKKNQS NLDSKKRGAA NFLNRMKQGS  600
SSNNGVLLDA LKNTPLTSES KGGSQVKKNE NAKRGEKKEQ ATTTRRNSET RQTKEKEKEK  660
EKEKEKEKER EKEKEREKEK EKEKEKEKEK EKEKEKEKEK EKGSPGKRNV GRPPKRGAAP  720
PPPPPAALGK RGREKAETEA ATSKQPKKRS RKL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.K00040.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012857392.10.0PREDICTED: general transcriptional corepressor trfA
TrEMBLA0A2G9FZQ10.0A0A2G9FZQ1_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA42682136
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57980.11e-71DNA-binding bromodomain-containing protein