PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.J01815.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | bZIP | ||||||||
Protein Properties | Length: 458aa MW: 50624.5 Da PI: 8.0853 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 33.8 | 7.4e-11 | 190 | 228 | 5 | 43 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43 k rr+++NReAAr+sR+RKka++++Le L++ + Migut.J01815.1.p 190 KTLRRLAQNREAARKSRLRKKAYVQQLESSRVRLTQLEQ 228 7789************************86555555544 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.2E-8 | 184 | 232 | No hit | No description |
SMART | SM00338 | 3.7E-8 | 186 | 259 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.278 | 188 | 232 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14708 | 1.20E-23 | 190 | 242 | No hit | No description |
SuperFamily | SSF57959 | 1.04E-7 | 190 | 233 | No hit | No description |
Pfam | PF00170 | 4.5E-8 | 190 | 229 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 193 | 208 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 4.0E-31 | 283 | 357 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 458 aa Download sequence Send to blast |
MDSNKGSIGN KELSSQQNQI HHHNNNNNNN NNQISFGTMM HLSSSSSSSA INPGTFNISN 60 DGGAYDLGEL DQALFLYLDG QDHHHSAQEH RQNSGMRPHT LNIFPSQPMH VEPCATTSSK 120 RASGSGLVSS PASSGSKRSS EPSMELSNSN NPRKDVASAP QQTKAVKREG NRKGPTSSSE 180 HEGPKTPDPK TLRRLAQNRE AARKSRLRKK AYVQQLESSR VRLTQLEQEL QRARSQGFYL 240 GGNAILPGEQ GGLNPAAMGN MSADAAMFDL EYARWQEEHH RLMVELRNAV HEHLPENELR 300 IFVDNCLGHY DQVMNLKSII AKSDVFHLFS GSWKTPAERC FMWMGGFRPS ELIKIILSQI 360 EPLTEQQLMG ICGLQQSTHE AEEALSQGLE ALNSSLSETI TSDSLTITPN MNNYMSQMAL 420 AINQLSTLEG FVRQAYVRAR ERSIKTSTIV TARNVKS* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00491 | DAP | Transfer from AT5G06839 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.J01815.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012834376.1 | 0.0 | PREDICTED: transcription factor HBP-1b(c38) | ||||
Swissprot | Q52MZ2 | 0.0 | TGA10_TOBAC; bZIP transcription factor TGA10 | ||||
TrEMBL | A0A022RLS3 | 0.0 | A0A022RLS3_ERYGU; Uncharacterized protein (Fragment) | ||||
STRING | Migut.J01815.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2279 | 21 | 45 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06839.3 | 1e-157 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.J01815.1.p |