PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.J00698.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family TALE
Protein Properties Length: 414aa    MW: 46663.1 Da    PI: 6.9716
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.J00698.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox29.81e-091151521954
                       HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
          Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                       Fe   ++yp+ +++  LAk++gLt +qV++WF N R +
  Migut.J00698.1.p 115 FEHflHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVR 152
                       664459******************************88 PP
2BELL58.12.2e-195463172
              BELL 31 qtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72
                      q+vi  Fe++ag+gsak Yt+lAl++iS++FrcLkdai +qi
  Migut.J00698.1.p  5 QIVITWFEQAAGIGSAKTYTALALQTISKQFRCLKDAILGQI 46
                      89**************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF075264.3E-14542IPR006563POX domain
PROSITE profilePS5007112.14793156IPR001356Homeobox domain
SMARTSM003899.7E-1096160IPR001356Homeobox domain
CDDcd000863.75E-1296157No hitNo description
SuperFamilySSF466892.4E-1797163IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.9E-2999162IPR009057Homeodomain-like
PfamPF059201.4E-18113152IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009610Biological Processresponse to symbiotic fungus
GO:0009737Biological Processresponse to abscisic acid
GO:0010197Biological Processpolar nucleus fusion
GO:0010201Biological Processresponse to continuous far red light stimulus by the high-irradiance response system
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 414 aa     Download sequence    Send to blast
EVSTQIVITW FEQAAGIGSA KTYTALALQT ISKQFRCLKD AILGQIRSAS KSLGEDDVVL  60
ESGRIEGSSS RLKYVDNQIR QQRALQQLGM IQHNAWRPQR GLPERSVSVL RAWLFEHFLH  120
PYPKDSDKIM LAKQTGLTRS QVSNWFINAR VRLWKPMVEE MYTEEMKENE KNNNGSSEDD  180
KIINNNINNK TEHHNEEYST PKSTAPLQDK SPQQQQQQQH QNKSFVISRQ DNNNNMNISG  240
FNLIGSSSEI ETATIARESP KKLRISDMLM SKSSDDAENE SMSRDGGFTL MGGPTNFIGG  300
FGSYAINELG RFEPDHFQQH PYLGNGVSLT LGLPHCDNQL TMSSVPHHHH HHQAFMPTNQ  360
GMQLGRGVEI GETNDYVGMN AQQPNTHPTN VYENINIQNR KRFAAQLLPD FVA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A8e-16102160563Homeobox protein Meis2
3k2a_B8e-16102160563Homeobox protein Meis2
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.J00698.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012828641.10.0PREDICTED: BEL1-like homeodomain protein 1
SwissprotQ9SJ561e-115BLH1_ARATH; BEL1-like homeodomain protein 1
TrEMBLA0A022PRH80.0A0A022PRH8_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14782467
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35940.31e-113BEL1-like homeodomain 1
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]