PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.I00565.1.p
Common NameLOC105974031, MIMGU_mgv1a011503mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 280aa    MW: 31347.7 Da    PI: 9.3844
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.I00565.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM96.63.8e-30541841127
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykv.ePwdLpkkvkaeekewyfFskrdkkyat..gkrknratksgyWk.atgk 88 
                       lppGf F+Ptdee+v +yL++kv +++l++  vi+e+ +++++ +P++Lp     +e+  yfFs++++++++   +r  r t++gyWk   g+
  Migut.I00565.1.p  54 LPPGFVFQPTDEEIVFQYLARKVFSRRLPA-YVIPEIdNVFTFpHPSELP---GDSEEGRYFFSNTKTNHRSliFNRIGRPTRAGYWKiVAGS 142
                       79***************************9.89****5566668******...3467789****99998875335688999*******889** PP

               NAM  89 dkevlskkgel...vglkktLvfykgrapkgektdWvmheyr 127
                       dk++ + +++    vg+kktLvfy+g++p++ +tdW+m+ y 
  Migut.I00565.1.p 143 DKQIGCCSKRImpiVGVKKTLVFYEGKHPSAARTDWFMDLYC 184
                       ****9965444788************************9997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.49E-3251220IPR003441NAC domain
PROSITE profilePS5100533.2854220IPR003441NAC domain
PfamPF023651.6E-1755184IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    Send to blast
MSLQKAPSMQ LSLSDSLSLS LHFLSLPLVP RKPKMEKLMK MMRSDNGENE SKKLPPGFVF  60
QPTDEEIVFQ YLARKVFSRR LPAYVIPEID NVFTFPHPSE LPGDSEEGRY FFSNTKTNHR  120
SLIFNRIGRP TRAGYWKIVA GSDKQIGCCS KRIMPIVGVK KTLVFYEGKH PSAARTDWFM  180
DLYCIALSRS TVSNTQHRKR HSQGCLVQIG TWVLCHVHFK KKSGGDSIGW RRNYDHFITS  240
DADSASCGSS SSSLDSDSSM FSEVSSSSDA SEMNSAPDI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-22392211169Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.I00565.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012854525.10.0PREDICTED: NAC transcription factor 29-like
TrEMBLA0A022Q5110.0A0A022Q511_ERYGU; Uncharacterized protein
STRINGMigut.I00565.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13872377
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.12e-35NAC domain containing protein 41