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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Migut.F01102.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family |
C2H2 |
Protein Properties |
Length: 599aa MW: 66585 Da PI: 5.4447 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.F01102.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 15.5 | 5e-05 | 77 | 98 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23
kC++C++ F ++ n++rHir+H
Migut.F01102.1.p 77 KCEKCSREFCSSINYRRHIRVH 98
7*******************99 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 599 aa
Download sequence Send
to blast |
MPVPKLYTSG TLNAIKSEEE NDSLDTVIRQ AIVKDPLLPF SRTGDNPVQW FQLLHALDQP 60 DLAGWPLMTP VKVQMQKCEK CSREFCSSIN YRRHIRVHRR SLNVNKESDK HRGLLAAFWD 120 KLSLEEAMEV VSFGDVSLKE IPGTSVIVAL TSFLHQPGVW ALPQFYVKAG STLLDIIQGN 180 PSRLPSSEEL FNILDDASER TFLCAGTAES VQKYLFAGEA AKNNLELKNL VACTSFLFEQ 240 KLVKAWLAEQ DAEALRCQKL LVEEEEAAQK RQAELLERKK QKKLRRKEQK MKEEIHGCKG 300 DLNVVIALSA ADGPVSTEAY GLSSPSDSCS NSEDMATNLD PGLETMQLQI EESEKDLEAQ 360 IDSTSEFINQ GHTHNIEPQI VSENDSQHLT TNNWQEVSNS QRVADNGFHE CRNLQILEPN 420 SVEIVGVSSD LTGNKVLTEK HKTEGDEKSL KPPFFMEETN YQVKKRYLND SPNTCSSKEA 480 EMLKQNASGK LVKADSVSHG DEPKGISPAK RGDGDSEDAV LLEKVSNQII STCKACCANK 540 KHYGNDVQGH LRFNSAAAKE FLIRRWKEAI SGDHVKLVYS SVCETPNVQH DNAVASTA*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 276 | 283 | ERKKQKKL |