PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D01677.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 348aa    MW: 38990.8 Da    PI: 9.3394
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D01677.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.80.0003690108321
                       ETTTTEEESSHHHHHHHHH CS
           zf-C2H2   3 CpdCgksFsrksnLkrHir 21 
                       C+ Cgk+F ++  L  H++
  Migut.D01677.1.p  90 CKECGKTFQSWKALFGHMK 108
                       ******************7 PP
2zf-C2H212.50.00044290312123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       ++C++C+k Fs+   L  H  +H
  Migut.D01677.1.p 290 FTCSICKKAFSSYQALGGHRASH 312
                       89***********9999998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576672.01E-5634No hitNo description
PROSITE profilePS501579.723936IPR007087Zinc finger, C2H2
SMARTSM003550.31931IPR015880Zinc finger, C2H2-like
PfamPF139121.5E-5932IPR007087Zinc finger, C2H2
PROSITE patternPS0002801131IPR007087Zinc finger, C2H2
SMARTSM003550.04688110IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.84788115IPR007087Zinc finger, C2H2
SuperFamilySSF576676.84E-1089110No hitNo description
PROSITE patternPS00028090110IPR007087Zinc finger, C2H2
PfamPF139129.8E-890110IPR007087Zinc finger, C2H2
SuperFamilySSF576676.84E-10285312No hitNo description
PROSITE profilePS5015710.18290317IPR007087Zinc finger, C2H2
SMARTSM003550.036290312IPR015880Zinc finger, C2H2-like
PfamPF139123.3E-10290314IPR007087Zinc finger, C2H2
PROSITE patternPS000280292312IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    Send to blast
MEEDKDQKHI CRFCSKSFPC GRSLGGHMRS HLITVPSTDH QKADENTPDK KKKTKKLPPL  60
VNGGIIPIPK KPNKPLNSSE EDTLLREKLC KECGKTFQSW KALFGHMKCH SVNGKTLASS  120
NAMEEYSSNS QSDNNNELEA SAKPMLPCKR KRSYRTKRYT TTSNTNSSSV TNTNLSSSIS  180
EIEEQEEQEE VALSLIILSR DRGDWRSGNS NSDRSSDFLE PKRVGKELEI KSLPISRNGL  240
ESEVNSPKNL IEGGGIFFER ERRNKINKAR RSLNNNNNVA SDFENKSKCF TCSICKKAFS  300
SYQALGGHRA SHKKFKGCCA PITGNMFEPE NSHSQGFRWA QEITLDC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14856DKKKKTKKL
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D01677.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012854071.10.0PREDICTED: zinc finger protein ZAT3-like isoform X2
TrEMBLA0A022Q8M71e-167A0A022Q8M7_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA44812241
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26610.12e-15C2H2-like zinc finger protein