PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.A00750.1.p | ||||||||
Common Name | LOC105973775, MIMGU_mgv1a002357mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | TALE | ||||||||
Protein Properties | Length: 685aa MW: 75529.2 Da PI: 6.9086 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 27 | 7.7e-09 | 441 | 478 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps ++ LA+++gL+ +qV++WF N R + Migut.A00750.1.p 441 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 478 554459******************************88 PP | |||||||
2 | BELL | 111 | 6.9e-36 | 305 | 373 | 4 | 72 |
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 elq++kakLl++leeVd+rYk+y++q+++vissFe ag gsa++Y slA++a+SrhFrcL+d i++qi Migut.A00750.1.p 305 ELQRRKAKLLQMLEEVDRRYKRYCDQMKAVISSFESTAGNGSARVYSSLASRAMSRHFRCLRDGIVSQI 373 89******************************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00574 | 5.1E-45 | 248 | 371 | IPR006563 | POX domain |
Pfam | PF07526 | 5.4E-40 | 253 | 369 | IPR006563 | POX domain |
PROSITE profile | PS50071 | 12.179 | 419 | 482 | IPR001356 | Homeobox domain |
SMART | SM00389 | 5.8E-9 | 422 | 486 | IPR001356 | Homeobox domain |
CDD | cd00086 | 2.56E-11 | 422 | 483 | No hit | No description |
SuperFamily | SSF46689 | 6.42E-17 | 423 | 488 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 1.3E-27 | 425 | 488 | IPR009057 | Homeodomain-like |
Pfam | PF05920 | 9.3E-18 | 439 | 478 | IPR008422 | Homeobox KN domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0048481 | Biological Process | plant ovule development | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005829 | Cellular Component | cytosol | ||||
GO:0009506 | Cellular Component | plasmodesma | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 685 aa Download sequence Send to blast |
MAGREEKSRD IMVAQSGYNI YSDVSSSTGN QNIPAAQFMS HPPTQQSFDP STTSTSAAEI 60 YNLTAGMEMI GFPSKHHHHH HHHHQHTTEN PGFWKGFFSS ATKPTGNINN NNGGGASSSS 120 SKEITDDPTS ADHFYQHQQN YSDAIQNQTP PSSSSWNNIH HHQNRFLGDD GGGGAVFPCE 180 GNERPSQGLS LSLSSSNPST IQLQSFQLIR HQQQNQNQNQ NQHVINMQSD VLMHHHHHQH 240 VIDNIHNHQS HAVITNSKYL LPTQELLYEF CSLQTDEIDH KSKPPKPTDS SLVDETAIKT 300 LDLLELQRRK AKLLQMLEEV DRRYKRYCDQ MKAVISSFES TAGNGSARVY SSLASRAMSR 360 HFRCLRDGIV SQIKAAKKAM GDKDVSAPGS VKGETPRLRL LDQTLRQQRA MQQMSLMESH 420 PWRPQRGLPE RSVSVLRAWL FEHFLHPYPS DVDKHILARQ TGLSRSQVSN WFINARVRLW 480 KPMVEEMYLE ELKEDEGVAG DGSGGGGGAA VYENDGLMSS QNHSRSEDLK PSHDQLVRMD 540 SECLSSIINN NNEAKRNKGG AAAAVQNEQH HQINPSFGRV IGDSYGSAAM ELDFSSYSHH 600 SSGGGSTVHY GGGGGGGVSL TLGLHQHGGG GVGLGTTQNS LFYGGRSEQM VEDNNQYTLL 660 DGGENQNLPY RNLMGAQLLH DLAG* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4xrs_A | 9e-16 | 428 | 485 | 1 | 58 | Homeobox protein Meis1 |
4xrs_B | 9e-16 | 428 | 485 | 1 | 58 | Homeobox protein Meis1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Plays a major role in ovule patterning and in determination of integument identity via its interaction with MADS-box factors. Formation of complex with AG-SEP dimers negatively regulates the carpel identity process and favors the maintenance of ovule identity. BEL1-STM complex maintains the indeterminacy of the inflorescence meristem. Required, with SPL, for cytokinin-induced PIN1 expression in ovules (PubMed:22786869). {ECO:0000269|PubMed:12244239, ECO:0000269|PubMed:17693535, ECO:0000269|PubMed:22786869}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.A00750.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012854274.1 | 0.0 | PREDICTED: homeobox protein BEL1 homolog | ||||
Refseq | XP_012854275.1 | 0.0 | PREDICTED: homeobox protein BEL1 homolog | ||||
Refseq | XP_012854276.1 | 0.0 | PREDICTED: homeobox protein BEL1 homolog | ||||
Swissprot | Q38897 | 1e-120 | BEL1_ARATH; Homeobox protein BEL1 homolog | ||||
TrEMBL | A0A022Q8E4 | 0.0 | A0A022Q8E4_ERYGU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5300 | 13 | 17 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G41410.1 | 4e-85 | TALE family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.A00750.1.p |
Entrez Gene | 105973775 |
Publications ? help Back to Top | |||
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