PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Medtr3g087530.1 | ||||||||
Common Name | MTR_3g087530 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
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Family | EIL | ||||||||
Protein Properties | Length: 429aa MW: 48941.1 Da PI: 4.9865 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 385.3 | 9.1e-118 | 32 | 303 | 1 | 278 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraW 94 eelkkrmwkd++ll++lke++++++ e+ +++ +e++rrkkmsraQD++LkYM k+m vc+a+GfvYgiipekgkpv+g+sdsLr+W Medtr3g087530.1 32 EELKKRMWKDKILLQKLKEKQENNT---EP-----EQQAKQEASRRKKMSRAQDSVLKYMAKIMDVCKAKGFVYGIIPEKGKPVSGSSDSLREW 117 8*********************976...44.....233558***************************************************** PP XXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXX......XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHH CS EIN3 95 Wkekvefdrngpaaisky...qaknlilsgessl..qtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwge 183 Wk++++fd+ +p a++ky ++e+ + ++++s+ h l++lqD+tlgSLLsalmqhc ppqrrfple+g++pPWWPtG+e wwge Medtr3g087530.1 118 WKDQIRFDQSAPLAVAKYlplL-----REDEHFNtiMADPNSYIHLLQDLQDSTLGSLLSALMQHCVPPQRRFPLERGISPPWWPTGSENWWGE 206 ******************4441.....33322221245799***************************************************** PP HT.--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX.XXXXXXXXXX CS EIN3 184 lg.lskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss.slrkqspkvt 275 +g l+++qg+ppykkphdlkkawkvsvL+ vikhmsp++e++r+l+ qsk lqdkm+a++s+++++v+nqee+++ + +++++ ++ Medtr3g087530.1 207 QGlLAQEQGPPPYKKPHDLKKAWKVSVLAGVIKHMSPDLEKLRKLVTQSKTLQDKMTARDSATWSKVMNQEEALLGVTDKCHKlTISEEGESSG 300 **999*******************************************************************9874322222222222222222 PP XXX CS EIN3 276 lsc 278 s+ Medtr3g087530.1 301 GSS 303 222 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 3.4E-116 | 32 | 278 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 4.0E-67 | 154 | 281 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 6.15E-59 | 156 | 280 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 429 aa Download sequence Send to blast |
MVVISEEIDP YGAEAEGTEE VTETETESVD YEELKKRMWK DKILLQKLKE KQENNTEPEQ 60 QAKQEASRRK KMSRAQDSVL KYMAKIMDVC KAKGFVYGII PEKGKPVSGS SDSLREWWKD 120 QIRFDQSAPL AVAKYLPLLR EDEHFNTIMA DPNSYIHLLQ DLQDSTLGSL LSALMQHCVP 180 PQRRFPLERG ISPPWWPTGS ENWWGEQGLL AQEQGPPPYK KPHDLKKAWK VSVLAGVIKH 240 MSPDLEKLRK LVTQSKTLQD KMTARDSATW SKVMNQEEAL LGVTDKCHKL TISEEGESSG 300 GSSSSSSNNR SEKRKFVFDV GGDDVEGPQS KLPMAMSLTH RVPKLLDCDA RIENVDDWLK 360 MGEIEGGKFG WDVEHWLNDV DDHEFEAALE MVKGNNNMDF TQNQEHNLHG QEEEKSIWDF 420 RYQYPSQD* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 7e-60 | 154 | 280 | 1 | 126 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 7e-60 | 154 | 280 | 1 | 126 | Protein ETHYLENE INSENSITIVE 3 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Medtr3g087530.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC125389 | 0.0 | AC125389.33 Medicago truncatula clone mth2-12a18, complete sequence. | |||
GenBank | CR940309 | 0.0 | CR940309.6 M.truncatula DNA sequence from clone MTH2-10C20 on chromosome 3, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003601983.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 5 protein | ||||
Swissprot | Q9FJQ5 | 1e-120 | EIL5_ARATH; ETHYLENE INSENSITIVE 3-like 5 protein | ||||
TrEMBL | G7J4B1 | 0.0 | G7J4B1_MEDTR; Ethylene insensitive protein | ||||
STRING | AES72234 | 0.0 | (Medicago truncatula) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF322 | 34 | 200 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65100.1 | 1e-114 | EIL family protein |
Link Out ? help Back to Top | |
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Phytozome | Medtr3g087530.1 |
Entrez Gene | 11427800 |
Publications ? help Back to Top | |||
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