PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr2g075700.1
Common NameMTR_2g075700
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family WRKY
Protein Properties Length: 311aa    MW: 35718.1 Da    PI: 5.8881
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr2g075700.1genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY68.69.5e-22143204159
                      ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                      +dDg++WrKYGqK++ ++++ rsYYrCt+    +C++ k+ver++e+p +  + Y g+H+++
  Medtr2g075700.1 143 MDDGHAWRKYGQKKIANTKYYRSYYRCTHMndqHCEAIKHVERTQENPPLYRTAYYGHHTCK 204
                      59***************************88889**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.9E-22135204IPR003657WRKY domain
PROSITE profilePS5081119.221138201IPR003657WRKY domain
SuperFamilySSF1182902.48E-21139204IPR003657WRKY domain
SMARTSM007746.0E-30143205IPR003657WRKY domain
PfamPF031063.3E-21144204IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MENLLWLPTN DKKAMEDELI RGRDMANQLL EALTYDDKSN IEVKGSNSKS SPVLPLIAGD  60
LVREVLKSLT NTLLLLNNCK DSNDVALPIT IRDFSFSTNC NKLEEDFDGS CKKLKTLNTK  120
NPKGSNKRKS ISPTWEKRTS ILMDDGHAWR KYGQKKIANT KYYRSYYRCT HMNDQHCEAI  180
KHVERTQENP PLYRTAYYGH HTCKSYLHSD INLESILSSN DSSILLSFDN NIPIKEENSF  240
PPSPLPFLAS TKEDPKEEIH DDYSSQNQLF SSDNLISCNF EVYFDYLRRA TMLSSIESFE  300
FENVYDQLGF *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A4e-19143204869OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr2g075700.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1477130.0AC147713.21 Medicago truncatula clone mth2-138b11, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003596301.10.0probable WRKY transcription factor 63
TrEMBLG7IR310.0G7IR31_MEDTR; Putative transcription factor WRKY family
STRINGAES665520.0(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF126381134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22570.15e-22WRKY DNA-binding protein 38
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]