PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Mapoly0001s0021.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
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Family | bZIP | ||||||||
Protein Properties | Length: 270aa MW: 28842.7 Da PI: 7.6753 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 40.6 | 5.7e-13 | 190 | 252 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +ke kr +r+ +NR++A+ R+RKka++ Le ++keL++ N++L +++++l+ e + l++ v Mapoly0001s0021.1.p 190 DKEHKRLKRLLRNRVSAQQARERKKAYLSDLEVRSKELQQRNEELEEKVSTLQRENYMLRQIV 252 5899***************************************************99998876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.3E-13 | 190 | 254 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.8E-12 | 191 | 252 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 12.254 | 192 | 255 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.13E-12 | 194 | 252 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.7E-15 | 194 | 254 | No hit | No description |
CDD | cd14704 | 1.10E-21 | 195 | 245 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 197 | 212 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0009740 | Biological Process | gibberellic acid mediated signaling pathway | ||||
GO:0010017 | Biological Process | red or far-red light signaling pathway | ||||
GO:0010099 | Biological Process | regulation of photomorphogenesis | ||||
GO:0010114 | Biological Process | response to red light | ||||
GO:0010218 | Biological Process | response to far red light | ||||
GO:0010224 | Biological Process | response to UV-B | ||||
GO:0031539 | Biological Process | positive regulation of anthocyanin metabolic process | ||||
GO:0042753 | Biological Process | positive regulation of circadian rhythm | ||||
GO:0080167 | Biological Process | response to karrikin | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003690 | Molecular Function | double-stranded DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 270 aa Download sequence Send to blast |
MNEVESQEAE IQWVDSDVDN DSDASDSDGT DGEVPDVTDD TPQTNLTNNP LPPGAVRLYS 60 KPLNSWNPKS PIIATSTSKE SPFAGGWKPV IDGKIQVGGE GAVHKGRSSP MQVASAGGSS 120 QKQSSSDGAS PSPAATGTSE PKKDGNESDS DVRRVPELMG KSGVLGATSA QPQGQTSGTR 180 TRKRGGASAD KEHKRLKRLL RNRVSAQQAR ERKKAYLSDL EVRSKELQQR NEELEEKVST 240 LQRENYMLRQ IVKNTALKKT GGDGPTGMQ* |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00117 | ampDAP | Transfer from AT5G11260 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024381386.1 | 5e-63 | transcription factor HY5-like | ||||
TrEMBL | A0A2R6XV16 | 0.0 | A0A2R6XV16_MARPO; Uncharacterized protein | ||||
STRING | PP1S80_72V6.1 | 4e-57 | (Physcomitrella patens) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP2081 | 17 | 37 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11260.1 | 3e-36 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Mapoly0001s0021.1.p |