PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.13G049600.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | ERF | ||||||||
Protein Properties | Length: 236aa MW: 26376.6 Da PI: 10.3611 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 34.5 | 5.3e-11 | 107 | 150 | 1 | 51 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 + +GV+++ +W A I++ +k+++lg+ g+ eeAa+++++a+ Manes.13G049600.1.p 107 CVMRGVYFKN--LKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 150 5689***966..5********4.....5********************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 8.531 | 84 | 163 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 3.6E-5 | 107 | 151 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 8.5E-8 | 108 | 153 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 2.3E-4 | 110 | 165 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 5.5E-6 | 111 | 155 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence Send to blast |
MVSLRRRKLL GLCAGRSSFL SPLPPIFNNG TAPLSSTQNS RSVSVHPLPS DDVKLPGEKI 60 VSRFGAGSSN LSASSSSKEQ QSQPYPGQPV KRRKRHRRKH VQNQEPCVMR GVYFKNLKWQ 120 AAIKVDKKQI HLGTVGSQEE AARLYDRAAF MCGREPNFEL SEEEKQELRK YKWDEFLAIT 180 RSAINNKKHK RHNGAGLQKR SEPESELQNV GEWDDKQGVN SFSASEDGEP DSSTS* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.13G049600.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021633239.1 | 1e-175 | ethylene-responsive transcription factor-like protein At4g13040 | ||||
Refseq | XP_021633240.1 | 1e-175 | ethylene-responsive transcription factor-like protein At4g13040 | ||||
Refseq | XP_021633242.1 | 1e-175 | ethylene-responsive transcription factor-like protein At4g13040 | ||||
Refseq | XP_021633243.1 | 1e-175 | ethylene-responsive transcription factor-like protein At4g13040 | ||||
TrEMBL | A0A251JGM9 | 1e-173 | A0A251JGM9_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_015207m | 1e-174 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5457 | 32 | 53 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13040.1 | 1e-46 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Manes.13G049600.1.p |