PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.08G046700.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bZIP
Protein Properties Length: 509aa    MW: 56951.8 Da    PI: 6.663
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.08G046700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.58.9e-11216250539
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39 
                          k  rr+++NReAAr+sR+RKka++++Le     L+
  Manes.08G046700.1.p 216 KTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLT 250
                          7789***********************98554444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1709.8E-9209258No hitNo description
SMARTSM003381.1E-7212292IPR004827Basic-leucine zipper domain
PfamPF077162.2E-8213257IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.266214258IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.27E-7216258No hitNo description
PROSITE patternPS000360219234IPR004827Basic-leucine zipper domain
PfamPF141441.1E-29308381IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 509 aa     Download sequence    Send to blast
MGFSRVLGGG VFEEEEEEEE QLEAKLLQSS FMATNKVINY STQIEQHQQN HHQHQQQQQQ  60
QQQHHHHQIQ EHHHHHQIPY GMMQSSSSSS VPGSFISKDA GAYDLGEFDQ ALFLYLDGQD  120
PSTVQDQRQT SGMRPPTLNI FPSQPMHVEP SSAKANTPVT SGSKRPSNQP SMELANARND  180
AASGPEPAKA IKREGNRKGP TTSSSEQEGP KTPDPKTLRR LAQNREAARK SRLRKKAYVQ  240
QLESSRIRLT QLEQELQRAR GQGIFFGGGG GLLGGDQGLP AGISTISSDA AVFDVEYTRW  300
LEEHHRLTCE LRAAVQEHLP ENELRLFVDN CLAQYDEVMS LKAMVAKSDV FHLVSGMWKT  360
PAERCFIWIG DFRPSDLIKI ILNQVEPLTE QQILGICGLQ QSTQEAEEAL SQGLEALNQS  420
LSDTIASDSL SCPPNMGNYM GQMAVAMNKL STLEGFVRQA DNLRHQTLHR LHQLLTARQA  480
ARCFLSIAEY FHRLRALSTL WLARPRQE*
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.08G046700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021620140.10.0bZIP transcription factor TGA10-like isoform X2
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A2C9VF070.0A0A2C9VF07_MANES; Uncharacterized protein
STRINGcassava4.1_025203m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47313455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-174bZIP family protein