PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.06G068900.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family ERF
Protein Properties Length: 351aa    MW: 38842.8 Da    PI: 4.5809
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.06G068900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.23.1e-16126174254
                  AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                          +  GVr++k +g+W+AeIr p++   ++r +lg++ t eeAa+a++a ++++e
  Manes.06G068900.1.p 126 KPVGVRQRK-WGKWAAEIRNPVT---KARTWLGTYNTLEEAAQAYEAKKREYE 174
                          789*****9.**********654...5***********************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.26E-19125168No hitNo description
PfamPF008474.5E-11126175IPR001471AP2/ERF domain
SMARTSM003804.0E-12126194IPR001471AP2/ERF domain
PROSITE profilePS5103217.53126188IPR001471AP2/ERF domain
PRINTSPR003671.6E-6127138IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-14128173IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.2E-18129173IPR001471AP2/ERF domain
PRINTSPR003671.6E-6149165IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    Send to blast
MPGFRPEPLN HSKPWKKVSS GESRMESKMR KIRVIYNDPY ATDSDSSDDE SERTVRRSFK  60
SKRFVREINL PSIVFPQSKA LEPESSCQDS NNSGKTPNKK RRILGKSLTP TTAATATTET  120
KASLKKPVGV RQRKWGKWAA EIRNPVTKAR TWLGTYNTLE EAAQAYEAKK REYEAMTIAA  180
SEKSQNISSS ATASQTQNIN TSNKNDPASV TSDDTESGLS HTSPSSVLDL DTSVVSKLNG  240
DSSDLIKEEG FDTDFVDLEI PDLGFIDEPL GSCQVDGDLN LGLDFGDLID DFVQLNDDYC  300
GIQNLEICGL DSDGPSELPD YDFEFGNEEF AYLDDHHHQQ HQLPINIACL *
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.06G068900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021616310.10.0ethylene-responsive transcription factor ERF119-like
RefseqXP_021616311.10.0ethylene-responsive transcription factor ERF119-like
TrEMBLA0A2C9VQX30.0A0A2C9VQX3_MANES; Uncharacterized protein
STRINGcassava4.1_022726m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26903472
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25890.22e-46ERF family protein