PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.02G121000.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | C2H2 | ||||||||
Protein Properties | Length: 379aa MW: 42207.6 Da PI: 8.6487 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.5 | 0.00022 | 141 | 164 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ Cg+ F + +L++H+ H Manes.02G121000.1.p 141 FPCTACGEIFQKPQLLEQHQAIkH 164 89******************9877 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50157 | 9.681 | 141 | 169 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 143 | 164 | IPR007087 | Zinc finger, C2H2 |
SuperFamily | SSF56399 | 1.15E-12 | 166 | 377 | No hit | No description |
Gene3D | G3DSA:3.90.228.10 | 2.2E-5 | 313 | 377 | IPR012317 | Poly(ADP-ribose) polymerase, catalytic domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003950 | Molecular Function | NAD+ ADP-ribosyltransferase activity | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 379 aa Download sequence Send to blast |
MAAVVSVFTK FLSIFILLLH LGCFIFTAKD HKPPTKKRKV SLLSPISSSS TRLKPRRALS 60 SSWFYLKRIF SSKTYKTTSS QAQSPVPTLA SARSSQHSIV SMIPPEDHAS VIPPHKKPSG 120 SCQESDISTN DQFFPLRNDI FPCTACGEIF QKPQLLEQHQ AIKHAVSELQ DGDSGKNIVH 180 IIFKTGWSCK EKNPEIHRIL KIHNGPKILS RFEEYRELVK AKAARNGGVK RRDERCIADG 240 NELLRFFCST FMCDLGANEN SSICNQQYCS VCGIIKSGFS PKMDGISTLS SSWRAHMTIP 300 EDVEEEFKFM NVKRAMLVCR VLAGRVGCEL EEEDKEDGGF DSVVARGGSG IHSRVDEEDL 360 VVFNPRAVLP CFVIVYTV* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.02G121000.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021605545.1 | 0.0 | uncharacterized protein LOC110609998 | ||||
TrEMBL | A0A2C9WFI3 | 0.0 | A0A2C9WFI3_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_034451m | 0.0 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF10668 | 29 | 36 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G29660.1 | 1e-119 | C2H2 family protein |
Link Out ? help Back to Top | |
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Phytozome | Manes.02G121000.1.p |