PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.01G163500.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family C2H2
Protein Properties Length: 383aa    MW: 42823.8 Da    PI: 8.0874
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.01G163500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.00022142165123
                          EEETTTTEEESSHHHHHHHHHH.T CS
              zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                          ++C+ Cg+ F  + +L++H+   H
  Manes.01G163500.1.p 142 FPCTACGEIFQKPQLLEQHQAIkH 165
                          89******************9877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.681142170IPR007087Zinc finger, C2H2
PROSITE patternPS000280144165IPR007087Zinc finger, C2H2
SuperFamilySSF563992.21E-14167381No hitNo description
Gene3DG3DSA:3.90.228.103.1E-4169283IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene3DG3DSA:3.90.228.105.6E-7314381IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    Send to blast
MATGIVSVFN KFLSIFILLF HLGCFTFTFR DHQPSTKKRK ASPPSPTSSS SSRLKPHRAL  60
SSSWTYLKRI FYSKTYKASS SQDQSPVPTL TSARSSQQSI VSMIPPEEHS SDVPPRTKSS  120
GSCQESEIST NDQFFPLRND IFPCTACGEI FQKPQLLEQH QAIKHAVSEL QDGDSGKNIV  180
HIIFKTGWSC KEKNPEIRRI LKIHNSPKIL SRFEEYREVV KAKAARNSVV KRRDERCVAD  240
GNELLRFYCS TFICDLGANE NSSICNQQYC SVCGIIKSGF SPKMDGISTL SSSWMAHVSI  300
PEEVEEEFKF MNVKRAMLVC RVVAGRVGCE MEDEEEVDKE NGGFDSVVGR GGSGVHSRLD  360
EEELMVFNPR AVLPCFVIVY TV*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.01G163500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021615906.10.0uncharacterized protein LOC110617446
TrEMBLA0A2C9WLF10.0A0A2C9WLF1_MANES; Uncharacterized protein
STRINGcassava4.1_033577m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106682936
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29660.11e-116C2H2 family protein