PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000190277
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bZIP
Protein Properties Length: 152aa    MW: 17760.2 Da    PI: 8.5008
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000190277genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.62.1e-1164115556
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                    ++ rr ++NRe+ArrsR RKk  +e  +++v+ L+ eN ++k++l    +++
  MDP0000190277  64 RKRRRTMSNRESARRSRWRKKRHLEDMTNEVERLKIENLEMKNRLGVVAQKC 115
                    577999************************************9998888877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.1E-860124IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.1E-961115No hitNo description
PROSITE profilePS5021710.41562114IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.34E-1064115No hitNo description
PfamPF001702.4E-964115IPR004827Basic-leucine zipper domain
CDDcd147027.50E-1465116No hitNo description
PROSITE patternPS0003606782IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    Send to blast
MMMSSSAMFI NHEPAHMGHF ECPVQETELT TAEIQELLSL LQAGNSASPS SEGSNREVYT  60
VDERKRRRTM SNRESARRSR WRKKRHLEDM TNEVERLKIE NLEMKNRLGV VAQKCHVTWR  120
ENDRLTSESL ALCARLSDLY RILIAMQMQY SQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16367RKRRR
26368RKRRRT
36584RRRTMSNRESARRSRWRKKR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008393702.21e-110basic leucine zipper 4
TrEMBLA0A498HUR11e-104A0A498HUR1_MALDO; Uncharacterized protein
STRINGXP_009361030.11e-107(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF59963052
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59530.11e-27basic leucine-zipper 4