PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MDP0000190186 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family | bZIP | ||||||||
Protein Properties | Length: 245aa MW: 27177.5 Da PI: 7.2364 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30 | 1.1e-09 | 88 | 133 | 5 | 50 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 r rr NReA r++R++Kka ++ Lee+vk+L+ N++L +l+ MDP0000190186 88 PRRRRPSGNREAVRKYREKKKAHTAYLEEEVKKLQVLNQQLVRKLQ 133 57788889*********************************98886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 8.6E-9 | 80 | 151 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.806 | 86 | 133 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.75E-7 | 89 | 133 | No hit | No description |
Pfam | PF07716 | 2.0E-13 | 89 | 133 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.1E-11 | 89 | 151 | No hit | No description |
CDD | cd14686 | 4.57E-12 | 96 | 133 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence Send to blast |
MDDGEVVTSD HALLPNPNSS STFHGSTYED TFFDEFLKTA RTCTHTHTCN PPGPDAAHTH 60 TCYHTHTQIL SSEDDDGTKN KDHSIPRPRR RRPSGNREAV RKYREKKKAH TAYLEEEVKK 120 LQVLNQQLVR KLQGQAILEA ERLRLRGLLL EFRGKIDTEL GVFPFGNQCN SNTYFEDSQC 180 NLQSSVGAMG LRCQTDLXCF CPPVGSSVQA SIGARGETXV PSGGNCQPAV IDCRANXNEA 240 STQAK |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008344616.2 | 0.0 | basic leucine zipper 24-like | ||||
Refseq | XP_028952234.1 | 0.0 | basic leucine zipper 24-like | ||||
Refseq | XP_028952236.1 | 0.0 | basic leucine zipper 24-like | ||||
TrEMBL | A0A498KIC0 | 1e-180 | A0A498KIC0_MALDO; Uncharacterized protein | ||||
STRING | XP_008344616.1 | 0.0 | (Malus domestica) | ||||
STRING | XP_008363297.1 | 0.0 | (Malus domestica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2567 | 32 | 77 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G16770.1 | 3e-34 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | MDP0000190186 |