PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj3g3v1729110.1
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family EIL
Protein Properties Length: 582aa    MW: 65388.4 Da    PI: 6.0531
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj3g3v1729110.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3437.51.2e-133334041351
                      XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraW 94 
                      eel++rmwkd+++lkrlke++k    +++ a+++ k ++s++qarrkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgkpv+g+sd++raW
  Lj3g3v1729110.1  33 EELERRMWKDRIKLKRLKEKQKLA--AQQ-AAEKGKPRQSSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSDNIRAW 123
                      8*****************999963..355.58999*********************************************************** PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--T CS
             EIN3  95 WkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglsk 188
                      Wkekv+fd+ngpaai+ky+a++l++s+++++  ++ +++++l++lqD+tlgSLLs+lmqhcdppqr++plekg++pPWWPtG+e+ww +l l++
  Lj3g3v1729110.1 124 WKEKVKFDKNGPAAIAKYEAECLAMSEAENS--RNGNSQSNLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGIPPPWWPTGNEDWWLHLNLPH 215
                      **************************99988..78999******************************************************** PP

                      T--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XX.......XXXXXXXX CS
             EIN3 189 dqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ss.......slrkqspk 273
                       q+ ppykkphdlkk+wkv+vLtavikhmsp+i++ir+++rqsk+lqdkm+akes+++l vl++ee+++++ s++  +s        +  ++++
  Lj3g3v1729110.1 216 GQS-PPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREEALIRQPSSDngMSgitetppGVLVENKQ 308
                      **9.9**********************************************************************6533666666533348888 PP

                      XXXXXXXXXXXX..........XXXXXX.XXXXXXXXXX.....................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX CS
             EIN3 274 vtlsceqkedve..........gkkeskikhvqavktta.....................gfpvvrkrkkkpsesakvsskevsrtcqssqfrg 336
                        +s+ +++dv+           k++++                                +++ + ++k+++s+s+++ +k        +++ +
  Lj3g3v1729110.1 309 AAASSASNYDVDgafdgvgsvsSKEDRR----------IqlmddaepsdnlhrnpvqdtdQVKKQPRKKRPRSRSNAT-DK--LPAQSDNEISH 389
                      99999999****7766655554333333..........1344445556688888888665666666666544444444.34..46677888999 PP

                      .XXXXXXXXXXXXXX CS
             EIN3 337 setelifadknsisq 351
                       e++ i++++n+++ 
  Lj3g3v1729110.1 390 VEPRSILPNMNQTET 404
                      99*******999875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048733.7E-12633280No hitNo description
Gene3DG3DSA:1.10.3180.102.7E-71155288IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167682.09E-61161284IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042762Biological Processregulation of sulfur metabolic process
GO:0071281Biological Processcellular response to iron ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 582 aa     Download sequence    Send to blast
MEEIGVCSDL EVDDIQCQNI AEKDVSDEEI EPEELERRMW KDRIKLKRLK EKQKLAAQQA  60
AEKGKPRQSS DQARRKKMSR AQDGILKYML KLMEVCKARG FVYGIIPEKG KPVSGSSDNI  120
RAWWKEKVKF DKNGPAAIAK YEAECLAMSE AENSRNGNSQ SNLQDLQDAT LGSLLSSLMQ  180
HCDPPQRKYP LEKGIPPPWW PTGNEDWWLH LNLPHGQSPP YKKPHDLKKM WKVGVLTAVI  240
KHMSPDIAKI RRHVRQSKCL QDKMTAKESA IWLGVLSREE ALIRQPSSDN GMSGITETPP  300
GVLVENKQAA ASSASNYDVD GAFDGVGSVS SKEDRRIQLM DDAEPSDNLH RNPVQDTDQV  360
KKQPRKKRPR SRSNATDKLP AQSDNEISHV EPRSILPNMN QTETQVVGLQ IHGNEQGNEP  420
GSAFRGLENH HEVPAQLPAP EFDHYSYLPA NNLISSDSMY GNGRPLQYPE LQTPNMHHET  480
TYNLYNPVAG YGHIQDVQPL QYVNPEIRPQ NDAVSMPAAA HMKSDEIPGG DLHYFGKDPF  540
QNELDRPIDH ALFGLDFGGL NSPPFDIGDF LGDDEMIQYF GA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A2e-731602919140ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Lja.14430.0pod| root
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00233DAPTransfer from AT1G73730Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj3g3v1729110.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0096320.0AP009632.1 Lotus japonicus genomic DNA, chromosome 3, clone: LjB09K03, BM1720, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004486935.10.0ETHYLENE INSENSITIVE 3-like 3 protein
SwissprotO231160.0EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLA0A1S2XF040.0A0A1S2XF04_CICAR; ETHYLENE INSENSITIVE 3-like 3 protein
STRINGXP_004486935.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-171ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]