PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV44365.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 405aa    MW: 44941.6 Da    PI: 6.6757
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV44365.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.64e-12339384655
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +++Er RR +i +++ +L+el+P+      k  + +++L +Av+YIk+Lq
  KZV44365.1 339 SIAERVRRTKISERMRKLQELVPNM----EKQTNTSDMLDLAVDYIKDLQ 384
                 689*********************6....4679****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.831333383IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.88E-15336394IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.83E-11337388No hitNo description
Gene3DG3DSA:4.10.280.102.7E-14338394IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.1E-12339389IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.7E-9339384IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010119Biological Processregulation of stomatal movement
GO:0042335Biological Processcuticle development
GO:0048573Biological Processphotoperiodism, flowering
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    Send to blast
MNNQEKQQFQ QNMQQTGSGL ARYRSAPSSY FATIFNRNDS SGHGGLETED FEQIFNLRAS  60
SPETQRIFSR FMNSSDSVQE PLLSPSHSST PFLTPRKETE FNQLQRQKSR DYSTSSPIMY  120
QNHSSEAANP VVDNSYNRLL GSVSSNRVAQ IKMEGGGTGG CISGPIGCGG SNLIRHSSSP  180
AGLFASINIE NEFVTRGMGN LGPNAETSPH FSSMHPSFSS GIMAPISEIP SRGLEDNDPG  240
DAHFDDDRTD YNEYNQGRFS VNSWDDSEIM SDNYFNSNKS VNTSDDQSTE IGNRPTTLLS  300
HHLSLPKSSA ELSAMEKLLQ DSVPCRIRAK RGCATHPRSI AERVRRTKIS ERMRKLQELV  360
PNMEKQTNTS DMLDLAVDYI KDLQAQVKVL ADNRAKCTCL AKQRP
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00195DAPTransfer from AT1G51140Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV44365.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011080320.11e-133transcription factor bHLH130
TrEMBLA0A2Z7CCC70.0A0A2Z7CCC7_9LAMI; Uncharacterized protein
STRINGMigut.D00568.1.p1e-120(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA46052239
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51140.13e-58bHLH family protein