PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV15134.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 280aa    MW: 31646.8 Da    PI: 7.1938
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV15134.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.52.1e-07130175555
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  n r rr  +++ ++   L++llP++     +K++ a++Le+A +YIk Lq
  KZV15134.1 130 ENTRRRRKQQKLSDKTRSLQKLLPWD-----RKMDMATVLEEAYKYIKFLQ 175
                 5667777778999************9.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.703125174IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.31E-10129188IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.3E-5130175IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.9E-9131183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.2E-4131180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.31E-7133179No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    Send to blast
MERESQFCIP QPPDHTAVAS VGDAYIDGVY EGLSFRTLLT YDLHASAFPP PATYVFDLPA  60
QTQNILVTPK IEPRNNAPEI SKFDEAFSML APPFNFFSDV ASSSQHYLPG LLSLEPPRSN  120
TVVDSRSRVE NTRRRRKQQK LSDKTRSLQK LLPWDRKMDM ATVLEEAYKY IKFLQAQVSI  180
LQAMPNAESY SRGTTPNLSH GSHGGVVGDH LGRLNRQQLL QVLLHSPIAQ TLLYSNGCCV  240
YSLEQLLLVM NNAERKAQFN NVNMLFDSNT DAWVSDYYRN
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV15134.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2Z7A0W70.0A0A2Z7A0W7_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA112501821
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22100.12e-19bHLH family protein