PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KN539565.1_FGP004 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 467aa MW: 51577.6 Da PI: 8.8567 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.8 | 1.7e-11 | 181 | 209 | 5 | 33 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLee 33 k rr+++NReAAr+sR+RKka+i++Le KN539565.1_FGP004 181 KTLRRLAQNREAARKSRLRKKAYIQQLES 209 6789***********************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.0E-5 | 177 | 239 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.795 | 179 | 221 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.06E-7 | 181 | 215 | No hit | No description |
Pfam | PF00170 | 7.5E-9 | 181 | 210 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 8.3E-8 | 182 | 217 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 184 | 199 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 6.9E-27 | 266 | 338 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 467 aa Download sequence Send to blast |
MEPLTFEPTF SERYIWPARG DVHSVRRERS KESSSYDMAD FDQASLFLYL DSHDQQSIQE 60 QRQTLNIFPS QPMHVADPAH EAKSAGVAMA MLPNGNQLQV LPSHPSKKPD QQGGQKINSS 120 VPTNPPGPNL PLPNSAKDNK NSSLIKGPKK CGLQKEGSSS GKGATTSNDP EREGRRALDP 180 KTLRRLAQNR EAARKSRLRK KAYIQQLESS RIRLSQLEQQ VHVARVQGAM LGAGDQHQGL 240 PSGPSAASLF DVEYGRWVEE HSKLIFQLRA ALNEQMAENQ LQVFVNGAMA QHDELLSLKG 300 AIARADIFHL LCGVWATPAE RCFLWLGGFR PSEAIKVMLK QVEPLSEGQL MSIYELQQAA 360 KGTEDALSHA MDGLQQSLSD TVAAPDGAAA GGFMGHMSLA MNKISAMEDI VRQADGLRQQ 420 TLHKLQHMLT IRQAARCFVA ISDYFHRLRA LSTLWVARPR PEEGPAM |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KN539565.1_FGP004 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK106988 | 0.0 | AK106988.1 Oryza sativa Japonica Group cDNA clone:002-120-A05, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015651202.1 | 0.0 | transcription factor TGAL7 isoform X1 | ||||
Swissprot | Q6H434 | 0.0 | TGAL7_ORYSJ; Transcription factor TGAL7 | ||||
TrEMBL | A0A0D3H4L0 | 0.0 | A0A0D3H4L0_9ORYZ; Uncharacterized protein | ||||
TrEMBL | A0A0E0QP17 | 0.0 | A0A0E0QP17_ORYRU; Uncharacterized protein | ||||
STRING | ORUFI09G03940.1 | 0.0 | (Oryza rufipogon) | ||||
STRING | OBART09G03520.1 | 0.0 | (Oryza barthii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2732 | 36 | 69 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06839.3 | 1e-126 | bZIP family protein |
Publications ? help Back to Top | |||
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