PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KN538957.1_FGP004 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 629aa MW: 67160.2 Da PI: 9.0602 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 39.5 | 1.2e-12 | 157 | 218 | 1 | 62 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 e++ +r+ r+++NRe+A+ sRqRKk ++eeLeekvk++ + +L ++++ + a+l+++ KN538957.1_FGP004 157 EEDKRRAARLMRNRESAQLSRQRKKRYVEELEEKVKSMHSVINDLNSRISFVVAQNATLRQQ 218 5677899*********************************9999999999888888877776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.2E-14 | 156 | 221 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.5E-10 | 158 | 219 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.76 | 159 | 219 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.9E-15 | 161 | 220 | No hit | No description |
SuperFamily | SSF57959 | 3.24E-11 | 161 | 219 | No hit | No description |
CDD | cd14704 | 1.54E-19 | 162 | 213 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 629 aa Download sequence Send to blast |
MATFQMRPYN ETVHIVSCGR GGDDDDDLPL DGLEFDLPGD FSVEDFLLRS PERDHSGEGS 60 AAGSGPTASP SSSPTTSASN SAVANGSGGE VKHEESDEGR SGGGDPKWSL KRKQASPGPS 120 SDAAKCRRSG DGDVSPSASG SRTAVDSDEG GTVCEEEEDK RRAARLMRNR ESAQLSRQRK 180 KRYVEELEEK VKSMHSVIND LNSRISFVVA QNATLRQQLS GGSVNCPPPG VYPPAPIPGM 240 HFPWVPGYAM RPPGSHVPLV PIPRLKPQQP VPSSKVVKKP ESKKTVENKS KSKTKTKKVA 300 SVSLLGLLLI MLVFGAFIPG FNQNFGMGGQ SDNAMFRNFG QSHARVLSVS SQDKSSLNNS 360 DMIGKMTGNT DGPGKKHQPA HNSSEILPAL LYVPRNGKHV KINGNLIIHS VLASEKAVAH 420 KASKDDSDQS ARDHKETSVA IAHYLSLPGK DVNRQETSSA DGPLPQWFRE GMEGPILNSG 480 MCSEVFQFDI STASSNPGGI IPASPVVNSS SVNATEKIPA HSAAYHGKLK NRRVMYNEAI 540 PLTGKTANNT EPFNRTSESS SKLPDSKPAS SVVVSVLADP REAGNGDGDP RVSPKPLSKI 600 FVVVLVDGVR YVTYSCTLPF KSSSPHLVN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 159 | 181 | KRRAARLMRNRESAQLSRQRKKR |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in endoplasmic reticulum (ER) stress response. Acts as ER stress sensor and activates the transcription factor BZIP50 and the chaperone BIP1. {ECO:0000269|PubMed:22050533, ECO:0000269|PubMed:22084314}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KN538957.1_FGP004 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by dithiothreitol- and tunicamycin-induced endoplasmic reticulum (ER) stress response. {ECO:0000269|PubMed:22084314}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK073142 | 0.0 | AK073142.1 Oryza sativa Japonica Group cDNA clone:J033024D10, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015640085.1 | 0.0 | bZIP transcription factor 39 | ||||
Swissprot | Q6AU90 | 0.0 | BZP39_ORYSJ; bZIP transcription factor 39 | ||||
TrEMBL | A0A0D9ZZ52 | 0.0 | A0A0D9ZZ52_9ORYZ; Uncharacterized protein | ||||
STRING | OGLUM05G17320.1 | 0.0 | (Oryza glumipatula) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP8228 | 35 | 45 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40950.1 | 6e-83 | bZIP family protein |
Publications ? help Back to Top | |||
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