PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN42756.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | ARR-B | ||||||||
Protein Properties | Length: 208aa MW: 23957.8 Da PI: 6.6223 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 23.6 | 1.2e-07 | 179 | 204 | 26 | 51 |
G2-like 26 kAtPktilelmkvkgLtlehvkSHLQ 51 +A Pk+i+e+m+++ L +e+v+SHLQ KHN42756.1 179 EAKPKRIVEAMNIPALIREQVASHLQ 204 599*********************** PP | |||||||
2 | Response_reg | 48.4 | 5e-17 | 19 | 124 | 1 | 106 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl vd + ++++++++++ + +y ++ + +d++ al++++ek+ +D+il+ + mp d +e+l++ + e ++p+i+++ ++++++ +a+ Ga KHN42756.1 19 VLAVDHDTTILDVIKKMCFRCHY-RAVTYSDASLALNYVREKKdcIDVILIEVHMPYGDSYEFLQHVTVET-NIPVIMMSLDDAKSTVMKAIIDGAC 113 799********************.***************99999***********************9988.9************************ PP EEEESS--HHH CS Response_reg 96 dflsKpfdpee 106 d+ Kp ++++ KHN42756.1 114 DYRIKPLHENQ 124 ******98877 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.40.50.2300 | 1.7E-25 | 16 | 147 | No hit | No description |
SuperFamily | SSF52172 | 6.4E-23 | 16 | 144 | IPR011006 | CheY-like superfamily |
SMART | SM00448 | 2.1E-12 | 17 | 129 | IPR001789 | Signal transduction response regulator, receiver domain |
PROSITE profile | PS50110 | 29.219 | 18 | 133 | IPR001789 | Signal transduction response regulator, receiver domain |
Pfam | PF00072 | 1.4E-12 | 19 | 125 | IPR001789 | Signal transduction response regulator, receiver domain |
CDD | cd00156 | 1.94E-13 | 20 | 133 | No hit | No description |
TIGRFAMs | TIGR01557 | 1.3E-7 | 179 | 208 | IPR006447 | Myb domain, plants |
Gene3D | G3DSA:1.10.10.60 | 6.2E-6 | 179 | 204 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0000160 | Biological Process | phosphorelay signal transduction system | ||||
GO:0005622 | Cellular Component | intracellular | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence Send to blast |
MGTYPTEKVF FQFPAGLRVL AVDHDTTILD VIKKMCFRCH YRAVTYSDAS LALNYVREKK 60 DCIDVILIEV HMPYGDSYEF LQHVTVETNI PVIMMSLDDA KSTVMKAIID GACDYRIKPL 120 HENQFKIMWK HVARKLWSKN QLPKKEDSEY VASYVLDSTV MDPEKIGSNF KDSDSYEPEA 180 KPKRIVEAMN IPALIREQVA SHLQVCFL |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN42756.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006580820.1 | 1e-131 | two-component response regulator ORR21 | ||||
Refseq | XP_028230825.1 | 1e-131 | two-component response regulator ORR21-like | ||||
TrEMBL | A0A0B2S7V5 | 1e-154 | A0A0B2S7V5_GLYSO; Two-component response regulator ARR14 | ||||
STRING | GLYMA19G06751.1 | 2e-67 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF14524 | 5 | 17 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01760.1 | 6e-41 | response regulator 14 |
Publications ? help Back to Top | |||
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