PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN36907.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | WRKY | ||||||||
Protein Properties | Length: 265aa MW: 29962.5 Da PI: 5.5904 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 30.3 | 8.3e-10 | 121 | 163 | 20 | 59 |
S-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 20 fprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +sYYrCt++ gC++ k+v+r +++p + +tY ++H+++ KHN36907.1 121 KRKSYYRCTHKndqGCQAIKQVQRIQDNPPLYRTTYYSHHTCK 163 568*******99999**************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00774 | 1.8E-9 | 114 | 164 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 8.5E-12 | 117 | 165 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.6E-11 | 117 | 163 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 8.37E-12 | 118 | 165 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 11.738 | 123 | 165 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 265 aa Download sequence Send to blast |
MENQLPNGKK ALEEELIRGH GMANQLLEVL VQDKLNTHLE EEGSSKSVLP FVEDLVRKVL 60 CSFTNTLLIL NSNNDVSNEV AASITLRDVS SSINCPKLQS VDETCKSPNI LNPKSGSGCY 120 KRKSYYRCTH KNDQGCQAIK QVQRIQDNPP LYRTTYYSHH TCKSPMNPEI IVEPFSPSAS 180 SILLSFDNNL QSKQENPFSS SILASTKHEP QEVIHNEHSA QNKLSTFENL LFYDYDIPFD 240 YSRNATLLSS TEAVQFENVY EQYGF |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN36907.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028189476.1 | 0.0 | WRKY DNA-binding transcription factor 70-like | ||||
TrEMBL | A0A445IAG6 | 0.0 | A0A445IAG6_GLYSO; Putative WRKY transcription factor 70 | ||||
STRING | GLYMA13G34261.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF12638 | 11 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22570.1 | 3e-20 | WRKY DNA-binding protein 38 |
Publications ? help Back to Top | |||
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