PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN31336.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 359aa    MW: 40749.5 Da    PI: 8.9359
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN31336.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.97e-1173106336
                 XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvk 36 
                  +k +rr+++NReAAr+sR+RKka++++Le    
  KHN31336.1  73 TDKIQRRLAQNREAARKSRLRKKAYVQQLESSRL 106
                 7899*************************97544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.1E-866117No hitNo description
SMARTSM003381.8E-771134IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.09473117IPR004827Basic-leucine zipper domain
PfamPF001709.6E-873109IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.8E-775116No hitNo description
CDDcd147083.91E-2275127No hitNo description
PROSITE patternPS0003607893IPR004827Basic-leucine zipper domain
PfamPF141442.7E-32161235IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042742Biological Processdefense response to bacterium
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    Send to blast
MNSASPQFVS SRRMSVYDPI HQISMWGEGF KSNGNLSAAM PLIDETDMKF DKDASHGILG  60
EPNKYDQEAN KPTDKIQRRL AQNREAARKS RLRKKAYVQQ LESSRLKLMQ LEQELERARQ  120
QGIYIGGGLD SNHLGFAGSV NSGITTFEME YGHWVNEQNR QITELRNALN AHIGDVELRI  180
LVDGMMSHYA EMFRMKSAAA KADVFYVMSG MWKTTAERFF LWIGGFRPSE LLKVLGPLIE  240
PLTEQQRLDI YNLGQSCQQA EDALSQGMDK LRQTLADSVA AGQFMEGTYI PQMTSAMDKL  300
KALVSFVNQA DHLRQETLQQ MSRILTIRQA ARCLLALGEY FQRLRALSSL WSNRPREPA
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00586DAPTransfer from AT5G65210Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN31336.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0978790.0BT097879.1 Soybean clone JCVI-FLGm-22P15 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006601811.10.0uncharacterized protein LOC100793353 isoform X1
RefseqXP_006601812.10.0uncharacterized protein LOC100793353 isoform X1
RefseqXP_006601813.10.0uncharacterized protein LOC100793353 isoform X1
RefseqXP_006601814.10.0uncharacterized protein LOC100793353 isoform X1
RefseqXP_014625703.10.0uncharacterized protein LOC100793353 isoform X1
RefseqXP_028213899.10.0transcription factor TGA4-like isoform X2
RefseqXP_028213900.10.0transcription factor TGA4-like isoform X2
RefseqXP_028213901.10.0transcription factor TGA4-like isoform X2
SwissprotQ392370.0TGA1_ARATH; Transcription factor TGA1
TrEMBLA0A445FMX90.0A0A445FMX9_GLYSO; Transcription factor TGA4 isoform A
TrEMBLI1MYW10.0I1MYW1_SOYBN; Uncharacterized protein
STRINGGLYMA18G02430.70.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF109634104
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65210.51e-178bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]
  4. Herrera-Vásquez A, et al.
    Transcriptional Control of Glutaredoxin GRXC9 Expression by a Salicylic Acid-Dependent and NPR1-Independent Pathway in Arabidopsis.
    Plant Mol. Biol. Rep., 2018.
    [PMID:26696694]
  5. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  6. Sun T, et al.
    TGACG-BINDING FACTOR 1 (TGA1) and TGA4 regulate salicylic acid and pipecolic acid biosynthesis by modulating the expression of SYSTEMIC ACQUIRED RESISTANCE DEFICIENT 1 (SARD1) and CALMODULIN-BINDING PROTEIN 60g (CBP60g).
    New Phytol., 2018. 217(1): p. 344-354
    [PMID:28898429]