PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN31086.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 198aa    MW: 22668.6 Da    PI: 5.9753
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN31086.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.83.1e-1583141563
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                 ++ rr+++NRe+ArrsR RK++ ++eL   v  L +eN+ L+++l++ ++  +++ +e+
  KHN31086.1  83 RKHRRMISNRESARRSRMRKQKHLDELWSQVVRLRTENHNLIDKLNHVSESHDRVLQEN 141
                 688*********************************************99999888876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.0E-1479143IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.73781144IPR004827Basic-leucine zipper domain
PfamPF001705.6E-1383141IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.6E-1283156No hitNo description
SuperFamilySSF579594.85E-1383133No hitNo description
CDDcd147024.82E-2184135No hitNo description
PROSITE patternPS00036086101IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000165Biological ProcessMAPK cascade
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005622Cellular Componentintracellular
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0004707Molecular FunctionMAP kinase activity
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    Send to blast
MVPSEIRGVH YLAPENPFLV PPNFSLLQSD IPNLHLNTLL SNFPNCHFPP SGHEFVVPPS  60
SCLSSNSTSD EADEIQFNII DERKHRRMIS NRESARRSRM RKQKHLDELW SQVVRLRTEN  120
HNLIDKLNHV SESHDRVLQE NARLKEEASA LRQMLADMQI GTAFACTMED LEDLPCNTSQ  180
LKPDPLNQSI TPADMIHE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
195102RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN31086.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF3505050.0AF350505.1 Phaseolus vulgaris bZip transcription factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001236950.11e-145bZIP transcription factor bZIP35
RefseqXP_028232452.11e-145basic leucine zipper 43-like
SwissprotQ9FMC21e-36BZP43_ARATH; Basic leucine zipper 43
TrEMBLA0A0B2R9681e-143A0A0B2R968_GLYSO; Basic leucine zipper 43
TrEMBLQ0GPI41e-143Q0GPI4_SOYBN; BZIP transcription factor bZIP35
STRINGGLYMA01G09510.11e-144(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16043399
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.11e-46basic leucine-zipper 42
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]
  2. Nowak K,Gaj MD
    Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis.
    J. Plant Physiol., 2016. 193: p. 119-26
    [PMID:26973252]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]