PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN22532.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | WRKY | ||||||||
Protein Properties | Length: 174aa MW: 19576.4 Da PI: 8.3191 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 80 | 2.6e-25 | 2 | 61 | 1 | 58 |
---SS-EEEEEEE--.TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 1 ldDgynWrKYGqKev.kgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 ++Dgy+W+KYGqK+v k+++ pr+Y+ C+ a +C+ kkv+rs +d+++++ tYeg+Hnh KHN22532.1 2 VKDGYQWKKYGQKKVtKDNPSPRAYFECSLApSCSNLKKVQRSIQDKSILVATYEGKHNH 61 58**********998689***********999**************************** PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 21.31 | 1 | 64 | IPR003657 | WRKY domain |
SMART | SM00774 | 5.0E-22 | 2 | 63 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.48E-19 | 2 | 63 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 1.3E-22 | 2 | 62 | IPR003657 | WRKY domain |
Pfam | PF03106 | 4.7E-20 | 3 | 61 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence Send to blast |
MVKDGYQWKK YGQKKVTKDN PSPRAYFECS LAPSCSNLKK VQRSIQDKSI LVATYEGKHN 60 HGVFHDLLKP SSSIPETSIM INNLPITNMP NDKDTLNIDL ALCNSDQTDI RLCDDVKQQN 120 HRGSKSKIEE YVTPLVKDPD FIMPLAEAVA HSLKSQTYKQ VGLNLNLGLP EPHL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 2e-16 | 1 | 61 | 16 | 74 | Probable WRKY transcription factor 4 |
2ayd_A | 2e-16 | 1 | 61 | 13 | 71 | WRKY transcription factor 1 |
2lex_A | 2e-16 | 1 | 61 | 16 | 74 | Probable WRKY transcription factor 4 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN22532.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003528286.1 | 1e-127 | probable WRKY transcription factor 40 | ||||
Refseq | XP_028236666.1 | 1e-127 | probable WRKY transcription factor 40 | ||||
TrEMBL | A0A0B2QS70 | 1e-126 | A0A0B2QS70_GLYSO; Putative WRKY transcription factor 40 | ||||
TrEMBL | A0A0R0JK30 | 1e-126 | A0A0R0JK30_SOYBN; Uncharacterized protein (Fragment) | ||||
STRING | GLYMA06G23990.2 | 1e-127 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF7398 | 30 | 44 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80840.1 | 2e-31 | WRKY DNA-binding protein 40 |