PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KHN14454.1

Organism

Glycine soja

Taxonomic ID

3848

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja

Family

bZIP

Protein Properties

Length: 193aa MW: 22324 Da PI: 6.0801

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KHN14454.1	genome	TCUHK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	48.6	1.7e-15	82	140	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ rr+++NRe+ArrsR RK++ ++eL v L +eN++L ++l++ ++ +k+ +e+ KHN14454.1 82 RKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLMDKLNHVSESHDKVAQEN 140 578**********************************************9999988875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	8.4E-14	78	142	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.668	80	143	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.31E-13	82	132	No hit	No description
Gene3D	G3DSA:1.20.5.170	3.1E-12	82	154	No hit	No description
Pfam	PF00170	4.2E-13	82	139	IPR004827	Basic-leucine zipper domain
CDD	cd14702	2.57E-19	83	134	No hit	No description
PROSITE pattern	PS00036	0	85	100	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0000165	Biological Process	MAPK cascade
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005622	Cellular Component	intracellular
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0004707	Molecular Function	MAP kinase activity
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence Send to blast
MQAREITGLN YLLPPDPCFN YSMVQNTIPT FQLHKLSNQF YGLQKPPPQV LADFSPPQSS 60 CISSNSTSDE ADEQQQSLIN ERKHRRMISN RESARRSRMR KQKHLDELWS QVVWLRNENH 120 QLMDKLNHVS ESHDKVAQEN VQLREEASEL RQMICDMQLH SPYHPPPLSP IDDDVSPYVK 180 SDSSITDSLD LLG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	94	101	RRSRMRKQ

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269\|PubMed:26973252}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KHN14454.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	BT091431	0.0	BT091431.1 Soybean clone JCVI-FLGm-7P16 unknown mRNA.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001235209.1	1e-141	BZIP transcription factor
Refseq	XP_028245833.1	1e-141	basic leucine zipper 43-like
Swissprot	Q9FMC2	4e-43	BZP43_ARATH; Basic leucine zipper 43
TrEMBL	A0A0B2Q369	1e-140	A0A0B2Q369_GLYSO; Basic leucine zipper 43
TrEMBL	C6T1X5	1e-140	C6T1X5_SOYBN; BZIP transcription factor
STRING	GLYMA08G28220.1	1e-141	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1604	33	99

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30530.1	5e-45	basic leucine-zipper 42

Publications ? help Back to Top
Qi X, et al. Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing. Nat Commun, 2014. 5: p. 4340 [PMID:25004933] Nowak K,Gaj MD Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis. J. Plant Physiol., 2016. 193: p. 119-26 [PMID:26973252] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]