PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN08605.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | TALE | ||||||||
Protein Properties | Length: 679aa MW: 74005.1 Da PI: 7.1854 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 29.3 | 1.5e-09 | 382 | 419 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + KHN08605.1 382 FEHflHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVR 419 554459******************************88 PP | |||||||
2 | BELL | 118.2 | 3.7e-38 | 246 | 317 | 1 | 72 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqe+q+kkakL+ +l+eV++rY+qy++q+++v+ssFe++ag+gsa+ Yt+lAl++iS++FrcLkdaia+q+ KHN08605.1 246 ERQEIQMKKAKLIGMLDEVEQRYRQYQQQMEIVVSSFEQAAGIGSARTYTALALQTISKQFRCLKDAIAGQV 317 79*******************************************************************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00574 | 8.5E-60 | 173 | 315 | IPR006563 | POX domain |
Pfam | PF07526 | 5.8E-46 | 180 | 314 | IPR006563 | POX domain |
PROSITE profile | PS50071 | 12.195 | 360 | 423 | IPR001356 | Homeobox domain |
CDD | cd00086 | 1.57E-12 | 363 | 423 | No hit | No description |
SMART | SM00389 | 5.3E-9 | 363 | 427 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 5.56E-17 | 364 | 431 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 6.7E-29 | 366 | 430 | IPR009057 | Homeodomain-like |
Pfam | PF05920 | 2.8E-18 | 380 | 419 | IPR008422 | Homeobox KN domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009610 | Biological Process | response to symbiotic fungus | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0010197 | Biological Process | polar nucleus fusion | ||||
GO:0010201 | Biological Process | response to continuous far red light stimulus by the high-irradiance response system | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005737 | Cellular Component | cytoplasm | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 679 aa Download sequence Send to blast |
MATYFHHGNS EIQSGGADGL QTLVLMNPGY IHYSDAPQQQ QQSSLAAGNL VFLNPAAVAG 60 GNNNSFNPHA PPSHTQQFVG VPLPNSQDLN HHSMHAHHDV SALHGFLPRM QYNPWNAFDP 120 TSAARETPRA QQGLSLGLGS FREGQAPAMS GDDLRVSGGS PSSASGVTNN GASGIHSVPL 180 SSKYLKAAHE LLEEVANVNN GIGTELRKKS GGQTRVIGES SAAGSGDGSV GGEGNGKRSS 240 ELSTAERQEI QMKKAKLIGM LDEVEQRYRQ YQQQMEIVVS SFEQAAGIGS ARTYTALALQ 300 TISKQFRCLK DAIAGQVRTA NKSLGEEDCF GGKMEGSRLK YVDHHLRQQR ALQQLGMIQH 360 NAWRPQRGLP ERSVSVLRAW LFEHFLHPYP KDSDKHMLAK QTGLTRSQVS NWFINARVRL 420 WKPMVEEMYM EEMKDHEQNG SEDKSSKSNE DSSSKMSAPQ DKGPSNETEA KSFNSKQEVS 480 KSQNTAMVSV SRPSTSPLGV NVRNQSGFSF MGSSELDGIT QGSPKKPRNH EMMHSPNSVP 540 SLNMDVKPND ENSEQLSMRF GVERQGRNES SFMGNQTNFI GGFGQYPIGD IGRFDAEQFT 600 PRFSGNGVSL TLGLDSLPGT HQTFLPNQNI QLGRSLDIGE PNEFGAISTS SPHSTAAYES 660 ISMQNPKRFA AQLLPDFVT |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3k2a_A | 4e-16 | 369 | 427 | 5 | 63 | Homeobox protein Meis2 |
3k2a_B | 4e-16 | 369 | 427 | 5 | 63 | Homeobox protein Meis2 |
4xrs_A | 3e-16 | 369 | 426 | 1 | 58 | Homeobox protein Meis1 |
4xrs_B | 3e-16 | 369 | 426 | 1 | 58 | Homeobox protein Meis1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN08605.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015037 | 0.0 | AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003521496.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Refseq | XP_006577097.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Refseq | XP_006577098.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Refseq | XP_028226107.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Refseq | XP_028226108.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Refseq | XP_028226109.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Swissprot | Q9SJ56 | 1e-173 | BLH1_ARATH; BEL1-like homeodomain protein 1 | ||||
TrEMBL | A0A0B2PHA6 | 0.0 | A0A0B2PHA6_GLYSO; BEL1-like homeodomain protein 1 | ||||
STRING | GLYMA03G36070.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1627 | 34 | 92 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35940.3 | 1e-149 | BEL1-like homeodomain 1 |
Publications ? help Back to Top | |||
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