PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHM98984.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 484aa    MW: 53927.1 Da    PI: 7.98
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHM98984.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.49.5e-11191220534
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeek 34 
                 k  rr+++NReAAr+sR+RKka++++Le  
  KHM98984.1 191 KTLRRLAQNREAARKSRLRKKAYVQQLESS 220
                 7789***********************974 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.0E-7182233No hitNo description
SMARTSM003387.2E-4187240IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.163189233IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.13E-7191233No hitNo description
PfamPF001707.5E-8191222IPR004827Basic-leucine zipper domain
CDDcd147081.27E-22191243No hitNo description
PROSITE patternPS000360194209IPR004827Basic-leucine zipper domain
PfamPF141443.3E-30284356IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 484 aa     Download sequence    Send to blast
MASSSVKGNT NSTTTQIEPL PPPLHLHHQP PQHHFHHHQI PDQQISFGML PSSSSASIPG  60
NFLSKDSGAY DLGELDQAFF LYLDGQADPS SVQDQKQNSS SGMRPPPTLN IFPSQPMHAV  120
PPSNSKVNMG LPSTQTSTGS KRQPETSMAK PKPHTEAAAA PEPPKAVKRE GNLKGTTSSS  180
EQEAPKTPDP KTLRRLAQNR EAARKSRLRK KAYVQQLESS RIKLNQIEQE LQRARAQGIL  240
MGGGNALLGG EQGFHMAMSG ISSEAAIFDV EYARWLEEHH RIVCELRAVL QEHLHENELR  300
LYVDNCLAHY DQVMNLKSMV AKTDVFHLVF GVWKTPAERC FMWIGGFRPS ELIKIILGQI  360
EPLTEQQILG ICGLQQSTQE AEEALSQGLD ALNQSLSETI TSDSLWCPPN MTNYMGQMAV  420
AINKLSTLES FVRQADNLRH QTIHRLHQLL TTRQAARCLV AISEYFHRLR ALSSLWSTRP  480
RQDQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHM98984.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150412e-97AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003519053.10.0bZIP transcription factor TGA10 isoform X1
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A0B2NPL20.0A0A0B2NPL2_GLYSO; Transcription factor HBP-1b(C1)
TrEMBLK7K9610.0K7K961_SOYBN; Uncharacterized protein
STRINGGLYMA02G30220.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47313455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-179bZIP family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]