PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KFK35037.1
Organism
Arabis alpina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
Family bZIP
Protein Properties Length: 334aa    MW: 37735.8 Da    PI: 6.8033
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KFK35037.1genomeMPIPBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.59.3e-11208251548
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                 kr +r   NR +A+rsR RK+++i eLe+ v +L++e + L  +
  KFK35037.1 208 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSVLSPR 251
                 899********************************998777655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-13204268IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.588206258IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.57E-11208262No hitNo description
Gene3DG3DSA:1.20.5.1703.0E-13208259No hitNo description
PfamPF001703.2E-9208252IPR004827Basic-leucine zipper domain
CDDcd147031.41E-23209259No hitNo description
PROSITE patternPS000360211226IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MTTTTTPHWP DFSSQKLPSI AATAAATAAT AGQNQQNQNP SWMDEFLDFS ATRRGTHRRS  60
ISDSIAFLEA PSSGVGNHHH HFDRFDDEQF MSMFNDDVHQ NHNNHNNNHH HHHHNVGHTR  120
SSSNTSTPSD HNSLSDEDNN NNKEPLPSDH DHHMENNNVD NDKNNVAGNN YNESDEVQSQ  180
CKTEPQDGPS SANQNSGGSS GNRIHDPKRV KRILANRQSA QRSRVRKLQY ISELERSVTS  240
LQTEVSVLSP RVAFLDHQRL LLNVDNSAIK QRIAALAQDK IFKDAHQEAL KREIERLRQV  300
YHQQSLKKME NSNVSDQSPV DIKPSVEKEQ LLNA
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKFK35037.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010427719.10.0PREDICTED: basic leucine zipper 61
SwissprotQ9M2K41e-179BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A087GYT50.0A0A087GYT5_ARAAL; Uncharacterized protein
STRINGA0A087GYT50.0(Arabis alpina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM17532777
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.11e-167bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]