PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S04081.20
Organism
Jatropha curcas
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family ERF
Protein Properties Length: 159aa    MW: 18661.1 Da    PI: 10.2794
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S04081.20genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.84.8e-123677351
            AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51
                    +GV++  k+ +W A I++      +k+++lg+ g+ eeAa+++++a+ 
  Jcr4S04081.20 36 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 77
                   79**98..47*********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.3E-43592IPR001471AP2/ERF domain
PfamPF008472.8E-63578IPR001471AP2/ERF domain
SuperFamilySSF541712.35E-83680IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.8E-63882IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    Send to blast
MQQYFFKQVL DVVLQPVKRR KRHRRKHVQN QEQCLMRGVY FKNMKWQAAI KVDKKQIHLG  60
TVGSQEEAAR LYDRAAFMCG REPNFELSEE EKQELRKFKW DEFLAITRSA INNKKHKRRN  120
GASLPKKSEA TLQNGDWDDK QGVNSFSASE DVEPDSSTS
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012085059.11e-105ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_020539077.11e-105ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_020539078.11e-105ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_020539079.11e-105ethylene-responsive transcription factor-like protein At4g13040
SwissprotQ56XP92e-47ERFL1_ARATH; Ethylene-responsive transcription factor-like protein At4g13040
TrEMBLA0A067K3H41e-103A0A067K3H4_JATCU; Uncharacterized protein
STRINGPOPTR_0002s24750.49e-85(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54573253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.11e-49ERF family protein